| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1371 |
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| Symbol | |
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| ID | 4478279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1583622 |
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| End bp | 1584407 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725926 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_869011 |
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| Protein GI | 117919819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0255661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000695889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTGA AATGGCTAGG GGTACTTTTA GGATTTGCAT TACTGCCTAA GGTGTATGGG
GCAGAGGCGA CTGTACCTGA GACTACTCCA AAGGATACGG CTTCAACGGT TAAGATTACT
TACGATGATC CGCGTGATCC CTTTGAGGGA TTTAACCGTG CAATGTGGGA TTTCAACTAT
CTGTATTTGG ATCGGTATAT TTATCGTCCT GTCGCACATG GATATAACGA TTATCTGCCA
TTGCCCGCCA AAACGGGGAT AAACAACTTC GTACAGAATT TGGAAGAACC GAGTAGCCTA
GTTAACAATG CCTTACAGGG TAAATGGGGT TGGGCGGCAA ATGCTGGCGG CCGTTTTACG
GTGAACACCA CAATCGGGTT ACTCGGGGTA TTCGATGTGG CCGATATGAT GGGGATGCCA
CGCAAGCAAG ATGAATTTAA CGAAGTGTTA GGCTACTACG GCGTGCCAAA CGGACCGTAT
TTTATGGCTC CTTTTGCCGG CCCCTATGTA GTGCGAGAAC TCGCGTCGGA TTGGGTTGAT
GGTCTATACT TTCCACTATC TGAGCTAACA GTGTGGCAAT CCATTGTTAA ATGGGGACTT
AAGAGTCTTC ATGCGAGAGC ATCGGCGATT GACCAAGAAA GGCTTGTTGA TAATGCGCTC
GATCCCTATA CCTTTGTGAA AGATGCGTAC TTACAACACA TGGACTATAA AGTCTATGAT
GGCAATGTTC CTCAAAAACA AGAAGATGAT GAGTTGCTCG ATCAGTACAT GCAGGAACTT
GAGTAA
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| Protein sequence | MKLKWLGVLL GFALLPKVYG AEATVPETTP KDTASTVKIT YDDPRDPFEG FNRAMWDFNY
LYLDRYIYRP VAHGYNDYLP LPAKTGINNF VQNLEEPSSL VNNALQGKWG WAANAGGRFT
VNTTIGLLGV FDVADMMGMP RKQDEFNEVL GYYGVPNGPY FMAPFAGPYV VRELASDWVD
GLYFPLSELT VWQSIVKWGL KSLHARASAI DQERLVDNAL DPYTFVKDAY LQHMDYKVYD
GNVPQKQEDD ELLDQYMQEL E
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