Gene Shewana3_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1367 
Symbol 
ID4478275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1579950 
End bp1580444 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID639725922 
ProductCheW protein 
Protein accessionYP_869007 
Protein GI117919815 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00367325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGATA CAAGAAATGT CGCGGCCGTG GCTGCAAGTA AAGATGATGC AGTATTGCAA 
TGGGTTACCT TTAAGTTAGA CAACGAAACT TATGGTATCA ATGTGATGCA GGTGCAAGAG
GTGTTGCGTT ACACCGAGAT TGCCCCTGTG CCTGGCGCAC CCCATTACGT ATTAGGGATC
ATTAACCTGC GCGGCAATGT GGTGACCGTT ATCGATACTC GCTCACGTTT TGGCCTGCAA
TCGGCGGAAG TGGATGATTC GACTCGTATC GTGATTATCG AAGCTGAAAA ACAAGTTATC
GGTATTTTGG TGGATAGTGT GGCCGAAGTG GTTTATTTGC GCCGTTCTGA AATTGATAAT
GCCCCGAATG TCGGCACTGA AGAAAGCGCC AAGTTTATCC AAGGCGTGAG CAATCGCGAT
AACGAGCTAC TGATCCTTGT TGACTTAGAC AAGTTATTAT CCGATGAAGA ATGGGCTGAG
TTAAATCAGC TCTAA
 
Protein sequence
MKDTRNVAAV AASKDDAVLQ WVTFKLDNET YGINVMQVQE VLRYTEIAPV PGAPHYVLGI 
INLRGNVVTV IDTRSRFGLQ SAEVDDSTRI VIIEAEKQVI GILVDSVAEV VYLRRSEIDN
APNVGTEESA KFIQGVSNRD NELLILVDLD KLLSDEEWAE LNQL