Gene Shewana3_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1363 
Symbol 
ID4479496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1576442 
End bp1577566 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content52% 
IMG OID639725918 
Productchemotaxis-specific methylesterase 
Protein accessionYP_869003 
Protein GI117919811 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0222536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA AAGTATTAGT CGTTGATGAC TCAAGTTTTT TTAGACGACG TGTTAGTGAA 
ATAGTCAATC AAGATCCTGA ACTGGAAGTG ATCGCGACGG CCTCTAACGG GGCCGAAGCG
GTGAAGATGG CTGCCGAGCT AAATCCTCAA GTCATTACAA TGGATATTGA AATGCCTGTC
ATGGACGGTA TTACGGCCGT GCGTGAGATC ATGGCGAAAT GTCCAACACC AATTTTGATG
TTTTCTTCAT TGACCCACGA TGGCGCCAAA GCCACGCTAG ATGCCCTCGA TGCGGGGGCG
CTCGATTTCT TACCTAAGCG CTTTGAAGAT ATTGCGACCA ATAAAGACGA AGCAATTCTA
TTATTGCAGC AAAGGGTTAA AGCCTTAGGT CGTCGCCGGA TTTTCCGCCC GACGGTGCGT
CCAACGGCGC CTACGCCGCC ACCTCGCCAG AGTGCGAGTA CCGTATTAGG CGGCGCTGCT
ACCCATGCGC AACCTGCGCC AGCGCCTGTG CGTTCTTCAC CTGCAACCTC GATTCGTCCA
AGTGGTAAGC AATATAAATT ATTGCTGATT GGCACATCGA CTGGCGGGCC TGTCGCCTTG
CAGAAGATTT TGACTCAGTT CCCAGCAAAT TATCCTCATC CTATTTTGCT TATCCAGCAT
ATGCCTGCGG CTTTCACCCC CGCTTTTGCG AACCGTTTAA ACGGTTTGTG TAAGATTGAA
GTGAAAGAAG CGGCTAATGG TGATGTATTG CGTCCAGGTT GCGCTTATCT TGCGCCAGGT
GGAATGCAAA TGATGGTTGA GCGCGCTGGT GTTACTGGCC GTGTTAAAGT CTTGGCGGGT
AGCGCTGAGA TGAATTACAA ACCCTGCGTC GACATTACCT TTGCCTCAGC ATCTAAAGCC
TATGGCGGGG ATGTGCTGGC GGTCGTGCTG ACGGGCATGG GAGCTGACGG CCGCGAAGGT
GCGCGTATGC TGAAATCGGT GGGCGCGACT ATTTGGGCTC AGGATGAGGC CAGCTGCGTG
GTTTATGGTA TGCCGCAGGC GGTGGCCAGT GCGGGTATCG CCACTCAGTC AATTTCTCTG
GATAACATGG CGGAGTCGAT TTTAAAAGAG TCTGCGCGTG GCTAA
 
Protein sequence
MAIKVLVVDD SSFFRRRVSE IVNQDPELEV IATASNGAEA VKMAAELNPQ VITMDIEMPV 
MDGITAVREI MAKCPTPILM FSSLTHDGAK ATLDALDAGA LDFLPKRFED IATNKDEAIL
LLQQRVKALG RRRIFRPTVR PTAPTPPPRQ SASTVLGGAA THAQPAPAPV RSSPATSIRP
SGKQYKLLLI GTSTGGPVAL QKILTQFPAN YPHPILLIQH MPAAFTPAFA NRLNGLCKIE
VKEAANGDVL RPGCAYLAPG GMQMMVERAG VTGRVKVLAG SAEMNYKPCV DITFASASKA
YGGDVLAVVL TGMGADGREG ARMLKSVGAT IWAQDEASCV VYGMPQAVAS AGIATQSISL
DNMAESILKE SARG