Gene Shewana3_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1361 
Symbol 
ID4479494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1573382 
End bp1574119 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID639725916 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_869001 
Protein GI117919809 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0601628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAC AAACATCAGG GCTCATTACG CTCGAGAAGG CTCAGCGTTT AGTTGAACTA 
TTAAGCGCGA ATGAACAAGC TCAAGCAGAT GATTTATTTA GGGAACTCGC GGCTCCACTT
CAACGGGAGC TCTTTGATGA AGTTGGTAAA CTTACAAGGC AACTTCACAG CGCATTAATG
GATTTCCAAG TTGATAATCG TTTGGTTGAA CTTGCGAATA CCGAAATTCC CGATGCTAAG
GAACGGCTAA GTTATGTCAT TGACATGACC GAGCAAGCAG CGAATAAAAC CATGGATGCG
GTAGAAGAGT GCTTGCCGCT CGCGAATGCA TTAACGGCGA ATATTCAACA AGTGATGCCT
TCTTGGGACA AATTGATGCG CCGTGAAATC GCTCTGAGCG ATTTTAAAGC GCTTTGCCAC
AATGTGCAGC ATTTGATGTC ACGTAGCGAA TTGGATTCCA ATCGCTTACG CGAATTGCTC
AACCAGATTT TGATGGCGCA GGATTTTCAG GACCTGACTG GACAAATGAT CCGGCGGGTG
ATCGATCTAG TGATGGAAGT TGAAAGTAAT CTGGTGTCTA TGCTGACAGT ATTTGGTGAG
CAACCCGTGA TTGAGAGTCA GATTACTCAG AAAAATAATA TTGAAGCTGA AGGACCGATA
ATGAATGCCG AGCTTCGTCA AGACGTCGTT ACCGGTCAAG ATGAAGTCGA TGATCTGCTG
TCGAGTCTGG GTTTCTAA
 
Protein sequence
MKSQTSGLIT LEKAQRLVEL LSANEQAQAD DLFRELAAPL QRELFDEVGK LTRQLHSALM 
DFQVDNRLVE LANTEIPDAK ERLSYVIDMT EQAANKTMDA VEECLPLANA LTANIQQVMP
SWDKLMRREI ALSDFKALCH NVQHLMSRSE LDSNRLRELL NQILMAQDFQ DLTGQMIRRV
IDLVMEVESN LVSMLTVFGE QPVIESQITQ KNNIEAEGPI MNAELRQDVV TGQDEVDDLL
SSLGF