Gene Shewana3_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1345 
SymbolfliI 
ID4479478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1558558 
End bp1559895 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID639725900 
Productflagellum-specific ATP synthase 
Protein accessionYP_868985 
Protein GI117919793 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.446012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATC GCCGCCATCA ACTGCTGAAT AAATTGAATC ATTGCATCGA TAAAGTCCCG 
CCGTTTCGAG CCGTCGCCAG TGGTCAACTG GTGCGTGTGG TAGGTTTAAC CTTAGAGGCG
AGTGGTTGCC GTGCGCCCGT GGGTAGCCTG TGCTCTATCG AAACCATGGC AGGAGAGTTG
ATTGCCGAAG TCGTCGGTTT TGACGATGAA CTGCTGTACC TTATGCCGAT TGAGGAATTA
CGCGGCGTGT TACCAGGCGC CCGTGTCGTC CCCCTCGGTG AGCAGGCGGG GCTGAGCGTG
GGCTTATCCC TCTTGGGACG CGTGCTCGAC GGCAATGGTG TGCCGTTAGA CGGTCTTGGC
GCATTATCGA CCGAACAGCA GGCGCCAAGG CACAGTAACG CCATCAACCC ACTTTCTCGC
CGTGCGATCA CCGAACCACT CGATGTGGGC GTGCGCGCCA TCAATGCCAT GCTCACCGTT
GGTAAAGGCC AACGTATGGG CCTATTTGCT GGCTCGGGTG TGGGTAAGAG TGTGCTGTTA
GGGATGATGA CCCGGGGCAC GACAGCTGAC ATCATTGTGG TGGGGCTCGT CGGGGAGCGT
GGCCGCGAAG TTAAAGAATT TATTGAAGAA ATCCTCGGTG AAAAGGGGAG AGCACGCTCA
GTTGTGGTGG CGGCGCCCGC CGATACCTCA CCCTTGATGC GCCTTCGCGC CTGTGAAACT
TCGACTCGTA TCGCTGAGTA TTTTCGTGAT TTAGGCTATA ACGTATTGTT ATTAATGGAT
AGTCTGACTC GTTACGCCCA AGCGCAGCGT GAGATTGCTC TGGCCGTAGG TGAACCTCCG
GCGACTAAAG GTTATCCACC TTCGGTATTT GCTAAATTGC CGCGTTTGGT TGAGCGGGCG
GGTAATGGCG GGCCTGGACA AGGTTCAATC ACCGCATTTT ATACTGTGCT GACCGAGGGC
GACGATCAAC AGGATCCGAT TGCCGATGCA TCTCGGGCGA TCCTCGATGG CCATATTGTG
CTATCTCGCT CACTGGCGGA TTCTGGGCAT TATCCTGCAA TCGATATTGA AGCTTCGATC
AGCCGTGTGG CCCCAATGGT GATTTCGAAC GAGCACTTAG AAGCCATGCG CCGCGTCAAG
CAGACTTATT CCCTCTATCA ACAGAATAAG GATCTGATTT CGATTGGTGC CTATGCCCAA
GGCAGCGATC CGCGAATCGA TAACGCTATA CGCCTGCAAC CTGCGATGAA TGCCTTCTTA
CGGCAGACCA TGCGTGATGC CTTTAGTTTT GCCGATAGCC AAGTCATGCT TGGGCAACTC
GCGGCACAAT GTAAATAA
 
Protein sequence
MQNRRHQLLN KLNHCIDKVP PFRAVASGQL VRVVGLTLEA SGCRAPVGSL CSIETMAGEL 
IAEVVGFDDE LLYLMPIEEL RGVLPGARVV PLGEQAGLSV GLSLLGRVLD GNGVPLDGLG
ALSTEQQAPR HSNAINPLSR RAITEPLDVG VRAINAMLTV GKGQRMGLFA GSGVGKSVLL
GMMTRGTTAD IIVVGLVGER GREVKEFIEE ILGEKGRARS VVVAAPADTS PLMRLRACET
STRIAEYFRD LGYNVLLLMD SLTRYAQAQR EIALAVGEPP ATKGYPPSVF AKLPRLVERA
GNGGPGQGSI TAFYTVLTEG DDQQDPIADA SRAILDGHIV LSRSLADSGH YPAIDIEASI
SRVAPMVISN EHLEAMRRVK QTYSLYQQNK DLISIGAYAQ GSDPRIDNAI RLQPAMNAFL
RQTMRDAFSF ADSQVMLGQL AAQCK