Gene Shewana3_1337 details

Gene Information

• Locus tag: Shewana3_1337
• Symbol: fliS
• ID: 4478851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. ANA-3
• Kingdom: Bacteria
• Replicon accession: NC_008577
• Strand: +
• Start bp: 1549700
• End bp: 1550113
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639725892
• Product: flagellar protein FliS
• Protein accession: YP_868977
• Protein GI: 117919785
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0984665
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.272409
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAGGAT CGCTGCAATC ATATCGTAAG GTTTCGTTAG AAAGTGAGAT CACTGTAGCT 
TCACCACATC GCATTATTCA GCTGATGTTT GCAGGGGCAT TACAACGCTT GGCTCAGAGC 
CGTTACGCTA TCGAACAAAA TGATTTAGTC AATAAGGGTA TTTATATCAG TAAGGCTATT 
GGAATTATTA CAGGATTGAG TAATAGTTTA AATATGGATG CTGGTGGGCA AATAGCTAAA 
AATTTGAGTG AGTTATACGA TTTTATGTTA CGTAAGATTT CTGAAGCTAA CCTCAATAAC 
GATGTAAAGG CCATTGATGA TGTTTGTGAT ATTTTACGAA CCATCAAAGA AGGGTGGGAT 
GCCATCCCTG TAGATAAACA CAATATATCT TCCCATACTG AAGAAGCTCG TTAA 

 

Protein sequence

MRGSLQSYRK VSLESEITVA SPHRIIQLMF AGALQRLAQS RYAIEQNDLV NKGIYISKAI 
GIITGLSNSL NMDAGGQIAK NLSELYDFML RKISEANLNN DVKAIDDVCD ILRTIKEGWD 
AIPVDKHNIS SHTEEAR