Gene Shewana3_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1332 
Symbol 
ID4478846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1545522 
End bp1546343 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content43% 
IMG OID639725887 
Productflagellin domain-containing protein 
Protein accessionYP_868972 
Protein GI117919780 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.344872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0535715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA CAGTTAATAC CAACGTGACT TCGATGAAGG CACAGAAAAA TTTAAATACA 
TCCAGTAGTG GTTTAGCAAC CTCTATGGAA CGTCTATCGA GCGGTCTGCG TATTAACAGT
GCGAAAGATG ACGCTGCTGG TCTAGCTATT TCTAACCGCT TAAATAGCCA AGTTCGTGGC
CTAGATGTGG GCATGCGTAA TGCTAACGAT GCGATTTCTA TTGCTCAAAT CGCTGAAGGT
GCGATGCAAG AACAAACTAA CATGTTGCAG CGTATGCGTG ACTTGACTGT ACAAGCTGAA
AACGGTGCAA ATAGTACCGA TGATTTAGAT GCAATACAAA AAGAGATCAA TCAATTATCT
GAAGAAATTA CTGCCATTGG TGACAGCACC GCTTTTGGTA ATACTCTACT GATGACTGGC
CTATTTTCAA CGGGTAAAAC GTTCCAAGTG GGTCACCAAG AAGGTGAAGA TATCACTATT
TCCGTTGGTA CTACTAATGC CGGGAGTTTA TCTGTCAACG CATTAGCTAT TGCTAGCGCA
GGAGGTCGTT CCACTGCGCT AGCAAACATT GATGCAGCGA TAAAAACCAT TGATAACCAA
CGTGCAAACT TAGGCGCTAA ACAAAACCGT TTAGCTTATA ACATCAGCAA CAGCGCGAAC
ACTCAAGCCA ACGTTGCCGA TGCTAAGAGC CGCATTGTGG ATGTAGACTT TGCAAAAGAA
ACCTCAGTAA TGACGAAAAA CCAAGTATTA CAACAAACGG GGTCTGCAAT GTTAGCTCAA
GCTAACCAAT TGCCTCAAGT TGCGCTGTCA CTACTGGGAT AA
 
Protein sequence
MAITVNTNVT SMKAQKNLNT SSSGLATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LDVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLTVQAE NGANSTDDLD AIQKEINQLS
EEITAIGDST AFGNTLLMTG LFSTGKTFQV GHQEGEDITI SVGTTNAGSL SVNALAIASA
GGRSTALANI DAAIKTIDNQ RANLGAKQNR LAYNISNSAN TQANVADAKS RIVDVDFAKE
TSVMTKNQVL QQTGSAMLAQ ANQLPQVALS LLG