Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1325 |
Symbol | flgF |
ID | 4478839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1537711 |
End bp | 1538454 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725880 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_868965 |
Protein GI | 161367438 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0771518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACAAAT TCCTTTATAT CTCCATGAGC GGCGCTAAGC AAAATATGAA TGAGTTGGCT TTGCGTGCCA ACAACTTAGC TAACGCCAAT ACCGATGGAT TTAAGTCGGA TATGGCGCAA GCCAGATCGA TGCAAGCCTT TGGTGAAGGA TTGCCGACAA GGGTCTTTGC CATGGTTGAA ACCCCCTCCG CCAATTTTCG TTCGGGCCCG ATTAAATCTA CTGGACGCGA TCTTGACGTT GCCATTAAAG GTGACGGTTG GTTTGCCGTG CAAGCACAGG ATGGTAGTGA AGCTTATACC CGTTCTGGCA GTCTCAGTTT TGACTCAACA GGTTTATTGC ATAACGACCG TGGTAATCCC GTGATGGGTG ATGCCGGACC GATTGTGTTA CCGCTGCCAA TTGAAAAGGT CACTATTTCA CAGGATGGGA TTATCTCTGT TCGTCCTCAA GGTGCGACGA CAGAAGTCGT CGAAGAGGTT GGAAGATTAA AGTTGGTAAA CCCCGGCAAT GCACAAATGA TGCGCGGCGA GGATGGGTTG TTCCGTTTGG TATCCGGTGA TCCGGCGCCT GCCGATCCTA GTGTATTTGT TGAAAGTGGT GCTGTAGAGG GCAGTAACGT CAACCCCGTG GATGAGATGG TGTCCTTAAT CGACCTACAG CGACAATTTG AATTGCAAGT GAAGATGATG AAAACCGCGG AAGAAAATGA CCGCGCTTCA TCCTCATTAA TGCGGATTAG TTAG
|
Protein sequence | MDKFLYISMS GAKQNMNELA LRANNLANAN TDGFKSDMAQ ARSMQAFGEG LPTRVFAMVE TPSANFRSGP IKSTGRDLDV AIKGDGWFAV QAQDGSEAYT RSGSLSFDST GLLHNDRGNP VMGDAGPIVL PLPIEKVTIS QDGIISVRPQ GATTEVVEEV GRLKLVNPGN AQMMRGEDGL FRLVSGDPAP ADPSVFVESG AVEGSNVNPV DEMVSLIDLQ RQFELQVKMM KTAEENDRAS SSLMRIS
|
| |