Gene Shewana3_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1325 
SymbolflgF 
ID4478839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1537711 
End bp1538454 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID639725880 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_868965 
Protein GI161367438 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0771518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAAAT TCCTTTATAT CTCCATGAGC GGCGCTAAGC AAAATATGAA TGAGTTGGCT 
TTGCGTGCCA ACAACTTAGC TAACGCCAAT ACCGATGGAT TTAAGTCGGA TATGGCGCAA
GCCAGATCGA TGCAAGCCTT TGGTGAAGGA TTGCCGACAA GGGTCTTTGC CATGGTTGAA
ACCCCCTCCG CCAATTTTCG TTCGGGCCCG ATTAAATCTA CTGGACGCGA TCTTGACGTT
GCCATTAAAG GTGACGGTTG GTTTGCCGTG CAAGCACAGG ATGGTAGTGA AGCTTATACC
CGTTCTGGCA GTCTCAGTTT TGACTCAACA GGTTTATTGC ATAACGACCG TGGTAATCCC
GTGATGGGTG ATGCCGGACC GATTGTGTTA CCGCTGCCAA TTGAAAAGGT CACTATTTCA
CAGGATGGGA TTATCTCTGT TCGTCCTCAA GGTGCGACGA CAGAAGTCGT CGAAGAGGTT
GGAAGATTAA AGTTGGTAAA CCCCGGCAAT GCACAAATGA TGCGCGGCGA GGATGGGTTG
TTCCGTTTGG TATCCGGTGA TCCGGCGCCT GCCGATCCTA GTGTATTTGT TGAAAGTGGT
GCTGTAGAGG GCAGTAACGT CAACCCCGTG GATGAGATGG TGTCCTTAAT CGACCTACAG
CGACAATTTG AATTGCAAGT GAAGATGATG AAAACCGCGG AAGAAAATGA CCGCGCTTCA
TCCTCATTAA TGCGGATTAG TTAG
 
Protein sequence
MDKFLYISMS GAKQNMNELA LRANNLANAN TDGFKSDMAQ ARSMQAFGEG LPTRVFAMVE 
TPSANFRSGP IKSTGRDLDV AIKGDGWFAV QAQDGSEAYT RSGSLSFDST GLLHNDRGNP
VMGDAGPIVL PLPIEKVTIS QDGIISVRPQ GATTEVVEEV GRLKLVNPGN AQMMRGEDGL
FRLVSGDPAP ADPSVFVESG AVEGSNVNPV DEMVSLIDLQ RQFELQVKMM KTAEENDRAS
SSLMRIS