| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1323 |
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| Symbol | flgD |
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| ID | 4478837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1535329 |
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| End bp | 1536108 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639725878 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_868963 |
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| Protein GI | 117919771 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.088062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCCTCA TTAACCAACT GAGTCAAACC TCATCGCAGC TGACTCAAAC AAACACTCAA
TCGAATACGG TATCAACCAA TAACACCAAG ACGTCGACTA ATTCTACCGG CAATCCATTT
TTGGATGGAT TACGTTTGCC GACTAGTTCT GCTGTTCCAG AGGCTAAGAG TCAGCAGCTC
ACTCAAGAGG ATTTTTTCTC ATTACTCAGC CAGCAGTTAT CGATGCAGGA TCCCTTTAAG
CCCGTTGATA ACGACCAGAT GATTGCACAG ATGGCATCTT TTTCTACTGT CGATGGCATT
TCTAAGTTAA ATGATCAAAT CGTTAATTTA AACAGTGTGA TGACATCAAG CCAAGCTTTG
CAAGCATCGG GATTAGTTGG GCGAAAAGTG CTGTTACCGA CAGATACGGG TTATATCTCT
GCAGAAAGCC CAGGCTTAAA TGGTGTGATC AGTACTTCCG AGAAAATTCC CGTCATTAAT
GTTCGAATCG AAGATGATAA AGGGCAAGTC GTTAGAACAT TTACTGTTGA TGGTAGTAAG
GGTGGTAACA CTGATGTCAA GTGGGATGGT TTGAATGATA AAGGAGAACC CGTTGCTGCA
GGTAATTACT CGATTAAAGC ATCGGGTTTG GTGAATGATA AATCACAAGC GTTAGCTGTA
TCGACCTATG CGCATGTTAC CAGTGTTTCT TTAGGTACTG CAGCGACTGG CGCCATTTTG
AATCTCAAGG GTGGAATGGC CTTTAAGCTG TCGGATGTAC TTGCGATTAG TGAAGTTTAA
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| Protein sequence | MSLINQLSQT SSQLTQTNTQ SNTVSTNNTK TSTNSTGNPF LDGLRLPTSS AVPEAKSQQL
TQEDFFSLLS QQLSMQDPFK PVDNDQMIAQ MASFSTVDGI SKLNDQIVNL NSVMTSSQAL
QASGLVGRKV LLPTDTGYIS AESPGLNGVI STSEKIPVIN VRIEDDKGQV VRTFTVDGSK
GGNTDVKWDG LNDKGEPVAA GNYSIKASGL VNDKSQALAV STYAHVTSVS LGTAATGAIL
NLKGGMAFKL SDVLAISEV
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