Gene Shewana3_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1322 
SymbolflgC 
ID4478836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1534888 
End bp1535304 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content45% 
IMG OID639725877 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_868962 
Protein GI117919770 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0795532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TTAATATCTT CGATGTTGCG GGGTCTGGCA TGTCAGCCCA GTCTCTGCGG 
CTAAATACTA CCGCGAGTAA CATTGCTAAC GCAGATTCAG TCTCCAGCAG TGTAGATAAA
ACTTACCGTT CTCGTCATCC CATTTTTGAA GCCGAAATGG CCAAGGCGCA AAGTCAGCAA
CAAGCTTCCC AAGGTGTCAC GGTGAAAGGC ATAGTCGAGA GTGATAAGCC CCTATTAAAA
GAGTATTCGC CGGATCATCC GATGGCGGAT GCTGATGGCT TTATTTACAA ACCAAATGTG
AATGTCATGG AAGAAATGGC TGACATGATT TCAGCTTCTC GCTCATATCA GATGAATGTT
CAAGTGGCTG AGGCGGCAAA ATCTATGCTG CAACAAACAC TTGGGATGGG TAAATAA
 
Protein sequence
MSLFNIFDVA GSGMSAQSLR LNTTASNIAN ADSVSSSVDK TYRSRHPIFE AEMAKAQSQQ 
QASQGVTVKG IVESDKPLLK EYSPDHPMAD ADGFIYKPNV NVMEEMADMI SASRSYQMNV
QVAEAAKSML QQTLGMGK