Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1322 |
Symbol | flgC |
ID | 4478836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1534888 |
End bp | 1535304 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725877 |
Product | flagellar basal body rod protein FlgC |
Protein accession | YP_868962 |
Protein GI | 117919770 |
COG category | [N] Cell motility |
COG ID | [COG1558] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0795532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAT TTAATATCTT CGATGTTGCG GGGTCTGGCA TGTCAGCCCA GTCTCTGCGG CTAAATACTA CCGCGAGTAA CATTGCTAAC GCAGATTCAG TCTCCAGCAG TGTAGATAAA ACTTACCGTT CTCGTCATCC CATTTTTGAA GCCGAAATGG CCAAGGCGCA AAGTCAGCAA CAAGCTTCCC AAGGTGTCAC GGTGAAAGGC ATAGTCGAGA GTGATAAGCC CCTATTAAAA GAGTATTCGC CGGATCATCC GATGGCGGAT GCTGATGGCT TTATTTACAA ACCAAATGTG AATGTCATGG AAGAAATGGC TGACATGATT TCAGCTTCTC GCTCATATCA GATGAATGTT CAAGTGGCTG AGGCGGCAAA ATCTATGCTG CAACAAACAC TTGGGATGGG TAAATAA
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Protein sequence | MSLFNIFDVA GSGMSAQSLR LNTTASNIAN ADSVSSSVDK TYRSRHPIFE AEMAKAQSQQ QASQGVTVKG IVESDKPLLK EYSPDHPMAD ADGFIYKPNV NVMEEMADMI SASRSYQMNV QVAEAAKSML QQTLGMGK
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