Gene Shewana3_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1320 
Symbol 
ID4478834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1533497 
End bp1534336 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content46% 
IMG OID639725875 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_868960 
Protein GI117919768 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.154264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTGC CTGACAAATC ACTCGCTGAA GCCGAATATA ATCAATTTAG GTTGTTCCTA 
GAACAACACA GCGGCATCGT ACTGGGGGAA AATAAACAAT ACCTAGTACG TAGCCGTCTT
GCTCCCTTGA TGGGCAAATA TAATCTGCCT TCGTTATCCG ATGTGGTAAA ACATTCGATG
AAGCCCACGG AGCGAGCCTT ACGGGCAGAA GTGATCGACG CCATGACTAC CAATGAAACC
TTATGGTTTC GTGACCGTTA TCCGTTTGAG TTGCTCAATA ATGTGTTGTT ACCTGAATAC
AGTAAGTTGG GGCGTCCATT AAAAATATGG TCCGCTGCCT GCTCGTCTGG CCAAGAGCCT
TATTCGTTGG CAATGACTAT CTTAGAATAT CAACAGAAGA AGCCGGGAGC TTTGCCGGGC
GGCGCCTCGA TTCAAGCAAC CGATCTTTCA CCTTCGATGT TGGAACGTTG CAAAAATGCC
GAATACGATA GTTTGGCGCT AGCGCGTGGT TTATCCGAGG AACGTAAGCG CCAGTTTTTT
GATGCTTTGC CCTCTGGCAA CATGCGAGTT AAGGATAACG TTAAGCGTTT AGTCAATTTT
CGCGCCCATA ACTTACTTGA GAGTTACACC TTACTCGGCA AGTTCGACAT TATCTTCTGT
CGAAATGTGC TGATCTATTT TGCCCCAGAG GCAAAAGCAA AAATTTTGCG GCAATTCGCT
GCCGCTTTAA ATCCGAAGGG CATACTCTTT CTCGGCGCGT CAGAGTCGAT TGCGGGTCTG
ACGGATGAAT TTGATATGGT TCGTTGCAAC CCGGGTATCT ATTACCAGAA AAAGACTTAA
 
Protein sequence
MNVPDKSLAE AEYNQFRLFL EQHSGIVLGE NKQYLVRSRL APLMGKYNLP SLSDVVKHSM 
KPTERALRAE VIDAMTTNET LWFRDRYPFE LLNNVLLPEY SKLGRPLKIW SAACSSGQEP
YSLAMTILEY QQKKPGALPG GASIQATDLS PSMLERCKNA EYDSLALARG LSEERKRQFF
DALPSGNMRV KDNVKRLVNF RAHNLLESYT LLGKFDIIFC RNVLIYFAPE AKAKILRQFA
AALNPKGILF LGASESIAGL TDEFDMVRCN PGIYYQKKT