Gene Shewana3_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1317 
Symbol 
ID4478831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1531160 
End bp1531486 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content46% 
IMG OID639725872 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_868957 
Protein GI117919765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.293254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG ATATTAGCAA ATTTAACGCC GGAGCGGCCG CGCAAGTCCG TTCAAACAGT 
ACTAAAAAGA GCAGTGAAAG CGAGCAATCG ACTCAGGTTG CGGCCAAATC GACTCAACAA
AAAGGTGACT CTGTTGTCAT TACGGCTCAA GCTCAACAGC TACAAGGAGC TCAAACCAAA
ATGGCCAGCC TACCTGAAGT CGACCAAAAG AAAGTCGCTG AAATTAAGCA AGCGATTGCC
GAAGGTCGCT ATAAAATTGA TCCCGAAAAG TTGGCGGCCA ACATTGCCAG CTTCGAAGCT
GAATTGAATG ACCTCAATAA AGAGTAA
 
Protein sequence
MAIDISKFNA GAAAQVRSNS TKKSSESEQS TQVAAKSTQQ KGDSVVITAQ AQQLQGAQTK 
MASLPEVDQK KVAEIKQAIA EGRYKIDPEK LAANIASFEA ELNDLNKE