Gene Shewana3_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1315 
Symbol 
ID4478829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1530180 
End bp1530629 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID639725870 
Producthypothetical protein 
Protein accessionYP_868955 
Protein GI117919763 
COG category[S] Function unknown 
COG ID[COG3018] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.423313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT ACCTATTCAT TGTTGCGGCG CTCCTACTAA CAGGGTGTGC TGCCAAAGAT 
AAATATGTTC AGTGGGAAGA TGTACCGCCA AGCAGTTTTC CTAAGCTGAC GGCCATAGGT
TATGCCCCGC TTGCGACTCA ACCGGCTAAA GAGCAGTCCC AACGAGTATT GATGGCGATG
CAGGCCTCAA AAATTGTGGC TTATCGTGAA CTGGCTGAAC AAGTGTATGG ACAAAAGATC
ACCGCCAATA GCAGTGTCAG TGATTGGATG CTGACAGATG ACAATGTTAA AGCTTCTGTG
ACTGGGGTGA TCCGCGGCGC GAGAGTGGTA AAAAGCTATC CGGCAGGGGA TCACTATGTC
ACTGAGTTGG AGCTTGATTT TGCCAAGGTA TGGCAAATTT ACCAACAGCA GAGCCGCCCA
CAAAGAATTA AAGACGTTAC CTATTTTTAG
 
Protein sequence
MKRYLFIVAA LLLTGCAAKD KYVQWEDVPP SSFPKLTAIG YAPLATQPAK EQSQRVLMAM 
QASKIVAYRE LAEQVYGQKI TANSSVSDWM LTDDNVKASV TGVIRGARVV KSYPAGDHYV
TELELDFAKV WQIYQQQSRP QRIKDVTYF