Gene Shewana3_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1313 
Symbol 
ID4478827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1528145 
End bp1529311 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content47% 
IMG OID639725868 
Producthypothetical protein 
Protein accessionYP_868953 
Protein GI117919761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.356273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAC TAAGAAAGAA CTTGCTCATA ATCAGCAGCC TACTGCTATT TGCTGCACAG 
GCAAACGCCG AATGGGTCGA GGCCAGTGGA GAAGCGGTGA TCACCAATGG CAACATCGCC
CAAGCACGTG AAGAAGCCAT CAATCAAGCG GTGAGTTATG CCACGCTCAG TACCGGTATC
CAAATCACCA GCGAACAGCA AACGACTAAC GGCAACTTAA CGCAAAACAG CTTTGCGATT
AATCGTTATG CCCAGGCGAT TAGCATTCAA TTGGTGAGCG AGCGTATTCA AGGCAATAAA
ATCTATGTAT CCCTCAGGCT CGATCTCAAT GATGATCCAA CCCAGCAATG CCCGGCAGGC
CAATTAAAGG CCGCCATCTT AATTCCCCAA GCGCAAATAA AAGACCGAGC ACAGTTACGC
TACGGACAAT TATCGGGATT TGAAGAAGTC ATCTCCGAGA AACTGGGTAA TAGTATTGAT
GGCTACTCAT CTACTGGTTT TAGCCATATC CATGCCAAAG AACGGCTTGA TATCGCACAA
GAATTGGTCG ATATCCGTGG CTATCGACTC CCAAGCTGGT TGAGTGAAAT CACCGATAGC
CAATATATTT TATTGCCACA AATCATTGAT ATATCGACTG AGCCTGTGCA ATCTACCTTT
ATGGGATGGT GGGATGAAGC GCCACTCAGA CAATTCCAAT TTAAACTCAG TCTCTTTCAC
GGCATTAGCG GCGAGGAAGT GTGGAGCAAA ACCTACAGTA CCTCTGCCCC GTGGGAGTTT
GAAGAACAGG CCATCATAGC CCCTAATAGT GACCGATTTT GGCGTTCATC CTATGGCAGA
AATATCAGCC AAATCATGCA AGAAGCAACT CGAGATATAG ACAACACGCT CAATTGCAGA
CCATTATTGG GGCAAGTCGT CAGCCGTCAA GGCGATAGAA TTATCCTCAA CTTAGGTCGC
AAACACGGCA TTCGAGTTGG CGATAAATTC CAGGTCGTGT TACAACAAAA CTTACCCGAT
AGACTCAACG AAATGCGTGC CGTCGCCACC AAGAGCCGAG CAACGGTAAA AATCGAACAA
GTTAGCGAAG AAAGTGCAAC CGCGATCCTC GTTGACCAAA ATGCGGCTTA CAATGTACAG
ATAAACGACA TCGCGCTTAA GATTTAA
 
Protein sequence
MNILRKNLLI ISSLLLFAAQ ANAEWVEASG EAVITNGNIA QAREEAINQA VSYATLSTGI 
QITSEQQTTN GNLTQNSFAI NRYAQAISIQ LVSERIQGNK IYVSLRLDLN DDPTQQCPAG
QLKAAILIPQ AQIKDRAQLR YGQLSGFEEV ISEKLGNSID GYSSTGFSHI HAKERLDIAQ
ELVDIRGYRL PSWLSEITDS QYILLPQIID ISTEPVQSTF MGWWDEAPLR QFQFKLSLFH
GISGEEVWSK TYSTSAPWEF EEQAIIAPNS DRFWRSSYGR NISQIMQEAT RDIDNTLNCR
PLLGQVVSRQ GDRIILNLGR KHGIRVGDKF QVVLQQNLPD RLNEMRAVAT KSRATVKIEQ
VSEESATAIL VDQNAAYNVQ INDIALKI