Gene Shewana3_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1307 
Symbol 
ID4478820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1521838 
End bp1522539 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID639725861 
Producthypothetical protein 
Protein accessionYP_868947 
Protein GI117919755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.760203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCG CCATTATGCA ACCGACTTTT TTGCCTTGGA GTGGCTACTT TAACTTAATG 
GCCGAGGTGG ATGTGTTTGT CTTTCTCGAT GATGCCCAGT TTCAAAAAAG CTCTTGGCAT
AACCGCAATC GTATTCCTTT GAATAATATG CCTAATTGGC TAACAGTACC GGTACGGCAC
CAACACTTGG ATCAAACATT GCTTGCAACA CGTCTTGACA ATAAGACTCA CTGGCGTGAA
AAAATGACAA GAATGCTCGA ACAGACCTAT GCCAAACACG CTTTTAATTC TGAACTGTAC
TGTTTCATCA ATCTCATATC AAACGACAAC CACACCTCGC TTGCCGAATT AAATATTGCT
CTCATTGAAA TGATGGCTCA AAAATTAAGT ATTCAATGTA AAACTATAAG ATCCAGTGAA
CTCGATATTC CCGGTGTGAG GACGCGGAGA TTATTGTCGA TTCTGCATGA AATTAAAGCG
ACTGAGTACT TATCTCCACA GGGGGCAAGG GAGTATCTAA CAGCTGATGA TTTTACTGGT
CAAACTGATA TCCAATTATC TTTTCAGGAG TTCTTACCGC AGGTATATCC TCAAAGAAAA
ACTAATCACT TTATCGAAAA GCTTTCAATG CTGGATGTGG TAATGAATAT CGGTTGGTCT
AATTCAAAAG CTTACATAAC ACAAAATTAT TCAGGTAATT GA
 
Protein sequence
MKCAIMQPTF LPWSGYFNLM AEVDVFVFLD DAQFQKSSWH NRNRIPLNNM PNWLTVPVRH 
QHLDQTLLAT RLDNKTHWRE KMTRMLEQTY AKHAFNSELY CFINLISNDN HTSLAELNIA
LIEMMAQKLS IQCKTIRSSE LDIPGVRTRR LLSILHEIKA TEYLSPQGAR EYLTADDFTG
QTDIQLSFQE FLPQVYPQRK TNHFIEKLSM LDVVMNIGWS NSKAYITQNY SGN