| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1288 |
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| Symbol | |
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| ID | 4479862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1498780 |
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| End bp | 1500162 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639725842 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_868928 |
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| Protein GI | 117919736 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TGACCATCAT CGACCGTTTC CTCGATACGT TCTCGCGCTA CATCGACTCG
GGCTTCGGGC TGCTACAAGG CGAAGTGGCG TTTCTCACCG CCACGCTCAT CGTCATCGAC
ATGACGATCG CGGGACTGTA CTGGGCCATG AGCCACGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGCGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGC TGGCGAGCAT CGTGTTCCGC TCGTTCGCCG GCCTGGGAAT CACGGCCACC
GGATCGGCCA TCACGATGGA GAATTTTCTT CAGCCGGGGC GGCTGGCGAA AACCGGCATT
GACGCAGGAG CACCGATTCT GGAACAGATC GGGGACATGG CCGGGTTCCC CGAGGTGTTC
GTGAACATCG ACCCCATCGT GGTGATGTTC CTCGCCTGGC TGGTGGTGAT CCTCTGCTTC
TTCGTGCTGG CGGTGCAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCC
GGCTTCGTGC TGGTGCCGTT CGCGCTGTGG AACAAGACGA GCTTCCTGGC GGAAAAGGTG
CTCGGCAACG TGGTGTCTTC GGGCATCAAA GTCTTGGTGC TGGCCGTCAT CGTCGGCATC
GGTTCGGGTC TGTTCGCCGA GTTCCAAGCG CATCCCGATG AACCATCCAT CGACCATGCG
CTGGTCGTGA TGCTGGCCTC GCTCGCGCTG CTGGCGCTGG GCATCTTCGG CCCCGGCATC
GCCACCGGCC TGGTGTCCGG TGCGCCTCAG CTTGGCGCGG GCGCGATGGC CGGTGCTGCT
GTCGGCGCTG TCGGCACGGG CGTCGCCATC GGTGCCGCCG CGACCGGCGT GGGCGCCGCC
GTAGCCGCCG GGGCACGCAT GGCGCCAGCC GCCGCGAAGC TGGCCGGTGC CGGGGCGCGT
GCCGCCACCT CAGCGGCTGG CAACGCGCGG TCGGCGTTCC AGGCGGGTTC CACCGCTGCG
GGCGGCGGGG CCAAAGGCGC GGCGGCTGGC CTTGGCAATG TCGCCAAGAC CAGCGCACAG
GCCGCCAGCC GCCGCGTCGC TTCTGGTGCT TCCGCAGCAG GGCAGAAGAT GACCAGTTCC
TTTCGTGCCG GCTGGAACGG ATCTTCGGAC GATGCCGGTG CAGCCGCGGC GGGCCAATCC
GCCGCAAGCG AGGCCGCAGA CGGCGCTGCC AACTCGCAGA AGCAAGAGCA ACCCGCCTGG
GCCAAGCGGA TGCACCGCCG CCAGCAGATC ACCCATGCCG CGACCACCAC CGCCCACACG
CTGCGCGGTG GCGACGGCGG CGGCTCAGGG CAAGGCCCGA GCCTGCGCGA TTCCGATACC
TGA
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| Protein sequence | MNDVTIIDRF LDTFSRYIDS GFGLLQGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIIGN FNWLASIVFR SFAGLGITAT GSAITMENFL QPGRLAKTGI
DAGAPILEQI GDMAGFPEVF VNIDPIVVMF LAWLVVILCF FVLAVQLFIT LIEFKLTTLA
GFVLVPFALW NKTSFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQA HPDEPSIDHA
LVVMLASLAL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA VGAVGTGVAI GAAATGVGAA
VAAGARMAPA AAKLAGAGAR AATSAAGNAR SAFQAGSTAA GGGAKGAAAG LGNVAKTSAQ
AASRRVASGA SAAGQKMTSS FRAGWNGSSD DAGAAAAGQS AASEAADGAA NSQKQEQPAW
AKRMHRRQQI THAATTTAHT LRGGDGGGSG QGPSLRDSDT
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