| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1282 |
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| Symbol | |
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| ID | 4479856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1493533 |
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| End bp | 1494603 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639725836 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_868922 |
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| Protein GI | 117919730 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TTCCGCAGAT CCCGCCTCAA CCTCGTTCGT CCGCCGCAAC CTCACTGGAT
CGACGAATCC AGATGCTGCG CACGGCAATG GGGCCGCTGA TTGCCACCGC GCTCGAAGAC
CCGGACGTGG TGGAAATCAT GCTCAACCCC GACCGCACCC TATGGGTGGA TCGGCTGTCG
TCGGGCCGCG CACCGCTGGG CGTGGAACTG CCCGAAGCCG ATGGCGAACG CATCATCCGC
CTGGTGGCTG CGCACGTCGG TGCGGAAGTG CATCGCGGCC AGCCGCTGCT AACCGCCGAG
CTGCCGGAGA CGGGCGAACG CTTCGAGGGC ATCTTGCCGC CAGCCGCTCC CGGCCCGGCC
TTCGCGCTGC GCAAGCGTGC CGTGAACATC ATCGGCCTGG ATCAGTATGT GGCCGACGGC
ATCCTGACCG CTGGCCAGGC GGACTTCCTG CGCCGCGCCG TGCGCGAGCG CCAGAACGTA
CTGATCGCCG GCGGCACCAG TACCGGCAAG ACCACCCTCG CCAACGCTTT GCTGGCCGAG
ATCGCCGCCA CCGGCGACCG CGTGCTGGTG CTCGAAGACA CCATCGAGCT GCAATGCGCA
GCCCGTGACC ATGTGCCGCT GCGCACCCGT GCGGGCGTGG TGTCGATGCA GGAACTGGTG
CGCGCCACGA TGCGCCTGCG CCCGGATCGC GTCGTCGTCG GCGAAGTACG CGGCGGCGAA
GCCCTCGACC TCATCAAAGT GTGGGGAACA GGCCACCCCG GCGGCATCGC CACCATCCAC
GCCGGTTCCG CGCTAGGCGC TTTGCTGCGC CTCGAACAGT TGATCCTCGA AGTCGCAGTG
AATCCGCCAC GGGCGCTGAT CGCCGAGGCG GTCAACGTCG TCATCCACAT CGCCGGACGT
GGCCGCAAGC GCCACGTCGA AACCATCGCC CGTGTCGTCG GCTTCGACGG CACCGGCTAT
CGCCTGGCGG ACGCGCTGGA AACGCCGTTT CCCGAATTGA TCCCGCTTCC GCTCGCAGCC
GACGCCGCTG CGCTTCCCCC GTCCCCTGAC CAACCTGGAG AACTGCCATG A
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| Protein sequence | MSAVPQIPPQ PRSSAATSLD RRIQMLRTAM GPLIATALED PDVVEIMLNP DRTLWVDRLS
SGRAPLGVEL PEADGERIIR LVAAHVGAEV HRGQPLLTAE LPETGERFEG ILPPAAPGPA
FALRKRAVNI IGLDQYVADG ILTAGQADFL RRAVRERQNV LIAGGTSTGK TTLANALLAE
IAATGDRVLV LEDTIELQCA ARDHVPLRTR AGVVSMQELV RATMRLRPDR VVVGEVRGGE
ALDLIKVWGT GHPGGIATIH AGSALGALLR LEQLILEVAV NPPRALIAEA VNVVIHIAGR
GRKRHVETIA RVVGFDGTGY RLADALETPF PELIPLPLAA DAAALPPSPD QPGELP
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