| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1278 |
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| Symbol | |
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| ID | 4479852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1489643 |
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| End bp | 1490584 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639725832 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_868918 |
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| Protein GI | 117919726 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTC GCCACCTTCG TTGCTTCCTT GCCGTTGCTG ACGAACTCCA CTTCGCTCGT
GCGGCGGAGA AACTGCACAT CGAACAGTCA CCGCTGTCAC GTGCTATCAA AGAACTGGAA
GAAGACTTGG GCGAGCAGTT ATTCGTCCGC ACCAGCCGCA GCACACGGTT GACACGGGCA
GGCAAACTGT TTTTGGAGCA TGTGCCGCGC GTCTTCACTG CTTTGGAGCA GGCGCGCGAC
AGCGTGAAGG CTGCAGCCAA TGGCTTTCAC GGACAGCTGC GCATCGCGTT GTCCGACGGC
ATCACACCAT CGCGTCTACC GATCTTGCTG GCGCTTTGCA GACAGGAGGA ACCGGAAGTT
GAACTCAGAT TCTTCGAGGT GCCGCTGTCG CAGCAGATCA AGGGGTTGCA GGACGACCTG
TATGACGTGG GATTCGCACA ATCCGATGAC GTGGGTGACG GCATCACCGT AGAGGCGGTG
TGGCACGATC CGCTCATGGT CGCAGTACCA GCCCGGCATC CATTGCTGAT ACATAAACGC
ATTCCTCTCG ATGAAGTGCT GCGCTATCCA CTGGTGCTAT GTGATCCCAA GGTATGTGAG
GGCCATACAC GCCAGGTCGA ACGTGTGTTG CGGCGTGCGG AGCAAGAACC CTTGATCGCC
GAGCGCGTGG CCTCCTGCGA CCTGATGATG GCGCTGGTGT CAGCCGGCTT TGCTCTGGGC
CTGGCGGGCG CGCCGCATAT CGCTTCCAGC CGCGAATCTG GTGTGGTCGC TCGGCCACTA
GCGGGCCGTT CGCCGATGCT GACAACGTAT CTGCTGCATC GGGAAGCGGA GACCTCGGAA
GTGCTGGCCC GTTTCATCGA GCGGGTACAG GCTATCGAAT CGCCTGAGGG CGTCAGGCTA
GTGCCACCGC CCGAATCCGA TCAGGAGGAA ATCGAACTAT GA
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| Protein sequence | MELRHLRCFL AVADELHFAR AAEKLHIEQS PLSRAIKELE EDLGEQLFVR TSRSTRLTRA
GKLFLEHVPR VFTALEQARD SVKAAANGFH GQLRIALSDG ITPSRLPILL ALCRQEEPEV
ELRFFEVPLS QQIKGLQDDL YDVGFAQSDD VGDGITVEAV WHDPLMVAVP ARHPLLIHKR
IPLDEVLRYP LVLCDPKVCE GHTRQVERVL RRAEQEPLIA ERVASCDLMM ALVSAGFALG
LAGAPHIASS RESGVVARPL AGRSPMLTTY LLHREAETSE VLARFIERVQ AIESPEGVRL
VPPPESDQEE IEL
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