| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1268 |
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| Symbol | |
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| ID | 4479842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1481079 |
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| End bp | 1483052 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639725822 |
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| Product | hypothetical protein |
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| Protein accession | YP_868908 |
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| Protein GI | 117919716 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT ACCACGATGA TGATTTTCGT ATCCGTCCCA ATGCGCCAAA GCACCGGGGA
CAGGGCTTTG TTTCCAAAGT GCTCAAGCAG ACAGGCAAAG CCAGTGGGGG CAAATCCTCG
GCACGCCGTC AGACATCGGC GGGTAGCGCT GGCCAGCGGC CCGGCTCACG TTTGGGGCGT
GGCCATACCG CCGCACGCTT TACGGGCTCT TCACTGACGC CGTTCTCGCG CCGTGTCACT
ATCAAAACCC TGCTGGTCAA TCAGCGCCGG GCTAGCCCGC AGTCGCTGGG GAAGCACCTG
CGCTATATCG AGCGCGACGG AGCGGGGCGT AATGGTGAGC CAGGCCGAGC CTATGGGCCG
CAGATCGACG AGGCCGATCT CGACGCTTTC AAGGAACGCT GTCAGGGCGA CCGGCACCAT
TTCCGTTTCA TCCTTTCGCC CGAGGATGGA GCTGAGCTAG GTGATCTACG CACTTACACA
CGTCATCTGA TGAGCCGGAT GGAAGCTGAT CTAGGCACGC AGCTGGATTG GGTGGCAGTG
GATCACTGGA ATACTGACAA CCCACACACG CATCTGGTTG TGCGTGGGCG TGACGACACT
GGCAAAGACC TCATCATCGC CGGCGACTAC ATCGCCCACG GCTTCCGCCA TCGCGCCGCC
GAACTGGCGA CGGAATGGCT GGGGCGGCGC ACTGAACTGG AGATCCAGCA GACCTTGCGA
CGCGAGGTGG AACAGGAGCG GTGGACGAGC CTGGATCGCA CGCTGCAACG AGAGGCTGGC
GATGACCACC GGGTGCAGAT CGAACGCTTT ATCGACCCGG CGTTGCAACG TCAGAGACAA
CTGCTCATTG GTCGCTTGCA ACACTTGCAG CGCCTGGGCT TGGCGGACGA GATACAGCCC
GGCACCTGGA ACATTCACGC CGATGCTGAG AAGACATTGC GTGCCCTGGG TGAACGTGGC
GATATCATCC GCACCCTGCA AAGGTCCATG AGCGGCCTTT CACGAGAACT GACCGTCTTT
GAACCGGGTG AGAGCGGGCG CAGTGTCATC GGGCGTGTGG CTGGTAAAGG ACTCGCCGAT
GAGCTGCGCG ACCGGGGTTA TTTGGTGATT GACGGCGTGG ATGGCAAGGC CCATTACATT
TCACTCAACA CCAGTGACGA GTTGACGAAC TATCCCACCG GGGCCGTGGT GGAAGTGCGC
TGTTCTGCTG AACTACGTTC GGCCGACCGC AACATCGCGG AACTGGCAAG CGACGGCCTG
TACCGCACAG ACCATCACCT AGTCATCGAA CAAGGCCGAA CCAAGGCTGG GCGCGACCCA
CAAGAAATCG TCGCAGCCCA TGTTCGTCGC CTGGAAGCGT TACGTCGTGT GGGCATTGTG
GAGCGCGTGG CCGAGGGGCT ATGGAAGGTG CCGGGCGACC TGCCTGAGCG TGGGCGTCAG
TATGATACTC AGCGTCTGGG CGGTGTGGCG GTGGAGCTGA AATCGCACCT GCCCATCGAA
CGTCAGGCGC GCGTGATCGG CGCTACTTGG CTTGACCAGC AACTAATCGG CGGTGGTCGA
GGATTCAGTG ACATAGGCTT TGGTGGAGAG GTGAAGGAAG CGTTGCAGGA ACGAGCCGAC
TTCCTCGAAG AACAGGGGCT GGCCCATCGA CGCGGGCTGG GTGTGATCCT GGCGCGCAAC
TTGTTGGCGA CGCTGCGCAA TCGGGAACTG GCACGAGCCG CGCAGGACAT TGTCGCCGAT
ACCGGCCTGG AGCATCGCCC CGTGGCCGAT GGGCAGCGCG TGGCGGGGAT CTACCGGCGC
AACGTCATGC TTGCCAGTGG ACGCTACGCC ATGCTCGATG ACGGTATGGG GTTCAGCCTG
GTGCCGTGGA AGCCGGTGAT CGAGCAGCGG CTGGGTCAGC AGATCGCCGC GACTGTACGT
GGTGGTGGGG TGTCGTGGGA GATTGGGCGG CAGAGAGGGC CAACCATCGC TTAG
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| Protein sequence | MSDYHDDDFR IRPNAPKHRG QGFVSKVLKQ TGKASGGKSS ARRQTSAGSA GQRPGSRLGR
GHTAARFTGS SLTPFSRRVT IKTLLVNQRR ASPQSLGKHL RYIERDGAGR NGEPGRAYGP
QIDEADLDAF KERCQGDRHH FRFILSPEDG AELGDLRTYT RHLMSRMEAD LGTQLDWVAV
DHWNTDNPHT HLVVRGRDDT GKDLIIAGDY IAHGFRHRAA ELATEWLGRR TELEIQQTLR
REVEQERWTS LDRTLQREAG DDHRVQIERF IDPALQRQRQ LLIGRLQHLQ RLGLADEIQP
GTWNIHADAE KTLRALGERG DIIRTLQRSM SGLSRELTVF EPGESGRSVI GRVAGKGLAD
ELRDRGYLVI DGVDGKAHYI SLNTSDELTN YPTGAVVEVR CSAELRSADR NIAELASDGL
YRTDHHLVIE QGRTKAGRDP QEIVAAHVRR LEALRRVGIV ERVAEGLWKV PGDLPERGRQ
YDTQRLGGVA VELKSHLPIE RQARVIGATW LDQQLIGGGR GFSDIGFGGE VKEALQERAD
FLEEQGLAHR RGLGVILARN LLATLRNREL ARAAQDIVAD TGLEHRPVAD GQRVAGIYRR
NVMLASGRYA MLDDGMGFSL VPWKPVIEQR LGQQIAATVR GGGVSWEIGR QRGPTIA
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