| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1254 |
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| Symbol | |
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| ID | 4479828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1468067 |
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| End bp | 1471351 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639725809 |
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| Product | DNA helicase related protein |
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| Protein accession | YP_868895 |
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| Protein GI | 117919703 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTAG AGGAAAGCAT TGTCCGGTAT TGGCATGCCG TTGAGTTGCT GCAACCGCAG
TCTGCCCCTA AGTTGAAGAA ACGCAGCAGT TCCTACGGTG CGTTCATTCA CAACACGCCC
ATAGGGAATC CTATCCCTCC TTGGTCAACG GCAAGTATTG TTGCAAAGCA AAAATTGCCC
AAGCGGCGCG TCTGGAGCCA CACACTCTTT GCCCATATCT ATGACAGTCG GCGTATCACT
GAACACCTCA AGGAAGTCTA TGGCGCTGAT CAGGGCTATC GTGAGCCACA GTATCGAGAG
TCGGCCCTAT TCGCAGCGAA ATTCACTATG ACTGGTCAGT TCGTCGATGA CAGTTTCGTG
CTCTCCAGCG AAGCATGGTT TCTGGGGCGG GTGTTGACGG GAAAGGATTG GACCAGAGGG
TTTGAGGAGG ACCAAACAGC CATCGGCGAT CATGTGAAAG TGCTGTTCGA GGGTCAGGTA
TCCAGCGGAG CGCTGCGTGA ACTGACACAC TGGATTCTCC AATACATCGG CGTAGCGGGT
TTCTTTGGTG ACATGGACGG CCACGTATTT CGCTTTCGCT CCCAGCCTGT CAATCCCAAC
AAGCCAGAGT CGGAAGACGA TCCACTCAAT AGCTTTCTGC TCGATGATCT CGCCAACGTC
GCCGACAGCA TCATCAAGGG AGGAAAAAGC AATCCGTTAG ATCAATACTT ATATCGACAC
GATGCACGAC TACGATTGCA AATAGACAAT GATCGCGAAT CGCTACCACT AATCGATCGA
TTGATGCCAG ACGCCTATCC CACGAGCTGC TGGCCCTCGG AACAGCATCT GGGGCTGGTG
CATTCCCAGC AGTTGGCTGT CAATACGATC CTCGCCACGC TTGGCAACGG ACAAGGACTG
TTGGGCATCA ATGGCCCCCC AGGCACAGGC AAGACGACGC TGCTGCGTGA TTTGATTGCC
ACCATTGTTA CCAGCCGGGC CGATGTGCTC GCCAAGCTAC CCCGCGCCTC CGATGGGTTT
GTCCGAAACG GACGCGAAGC AGCCAATGAT GGCGGTAAGG AACAGTCGTG CTTCAAACTC
GATCCAGCTC TGTATGGCTT CGAGATCGTT GTGGCTTCGT CCAATAACGG CGCGGTGGAA
AACGTCACGC TCGAATTACC CCAGCGCGAC AAGATCGACG AGAGCTGGCT GCCCGAGGCG
GAGTATTTCG CCGAGCTGGG CGAACTGGTG AGTGGAAAAC CTGCGTGGGG ATTGATTTCC
GGTGCGCTGG GTAGCAAAAC GCGGCGAACC AAGTTCGTGG AGCGCTACTT CTATGGTCAG
CGCCCGTTCG GCAGCGACGA CAAGGCGGAC CCTGACGCCG AAGATGAGGC CGAATTAGAT
GATGAATTTG GCGATGCTGT AAATACCTTG TTTTCTACGC CTTCCACGGT AGAGGAAAAG
TTTGGTGCAA GCGAGGAGAG CGACGAGGCA CCGGCGGACA AGGAAGAAGG ACCGAAAGGC
TTTCTCGGAT GGCTCAGTGC ATGCGCTGAG GTCAACAAGA CTCGCTCCCC GGAACAACGC
CAAGCCTTGT GGCAGGAAGC CATCGCCGAT TATGAGGCTG CCAAGACAGA GGTGCGCAGA
ACGTGTGCTG CTGCCAATCG CATCCGCGAG CTGATCCAAG CCCTCTGCAA GACAAGAAAG
CAGGTCGCGG AGCAATCTGA AGCGCTACGC ACTCTTGAAA GTAAACTGGC TGATGCGGTC
AATCAACTCT CTCGCCTGGA TGCCGAAGAG AACCGTCCTG CCAGCATGGC GCTGAAACAG
TGCTTGTATG AACTTGAGGT GCATCAAGCA CGAAAGCCGG GATTTTGGGC GAAAGTTTTC
AGTTTTTGGG GCGCGCAGCG AGACTGGGAT GCTAAGCGGA AACGGCTCGA AAGCCACCAC
GACTTGGCCA AATCCGAGTT TAGCCGGATA GCACGCCTCA CCAAGCAACT GGGTGCTTCG
CGGGAGAGCT TAGAAAAGCA CACCGCCGAT ACGCGACGTG CGCTTCAACG CTTGCGCAGC
CAATGCCAAG CACACATGCA AGATGCCATC GACGTGGCAA GGGAAGGCCA AGCCGATCAC
CTGCTCGCAT GGCTGGAAGA CGGCGCTATT GGTCGCGGCG ATGCCATCGA GCTGGCCGAG
CCTTGGCGCT TTGAAGGCTG GCGCCAAGCG CGGGCCCGCG TCTTCATTCA GGCACTCAAG
CTTCATCGGG TGTTCTTTGA ATTGGAAGCA TCCCGTATGC GCTCAAATCT GTTTCTCATC
AACGGAATGT TGACTGGCAC CCGCTACCAC GGCATCTCGC GTGACGCTAT TCGCTCTGCC
TGGGCGTCGC TGTTCATGGT CGTGCCGGTA TTGAGTAGCA CCTTCGCGTC GTTTGCGCGC
TCATTCGGCT CGTTGGGGGG CGGCGATATT GGCTGGCTGT TGGTGGACGA GGCTGGCCAG
GCATCACCCC AAGCAGCTGT CGGCGCGTTA TGGCGGTCCC GGCGTGCATT GCTGGTGGGC
GATCCGCTTC AACTCAAGCC GATCGTCACC GTCTCCGATG CCGTGCTCGA ACATATGCGT
ACACGCTACC AAGTCGATAC ACACTGGCTC CCCAATCGAC AATCCGCACA GACACTGGCT
GATGAAGCTA CCCGCTGGGG GCGCATGGCT GGACCGACCG ATGGCAAGAC TTGGGTAGGA
TTACCGTTGG TTGTTCACCG ACGCTGCGAC AAACCCATGT ATGCGCTCGC TAATCGCATC
GCCTATGACG GAGCGATGGT GTATGGAACC CTCACACCGC GCCCCGACAA GGAAACACCT
GCCAGCTTCC TGACAGGATG GATTCAAGCC AGCGGGGCGT CACAAGACAA CTGGGTACCA
GCCGAAGGCA AGGCCCTTCA GGATCTGCTT ACGCTGTTGC ATAGGGATGG CGTGAAGGCT
GAAGACATTG CGGTCATCAC CCCGTACAAA GCCGTCCAAG AAAATCTTAA AAGCATGCTC
TCTGACAAGA TGATATCCGG CACTATCCAT ACCATGCAGG GCAAGGAAGC ACCTATTGTC
ATTTTGGTGC TGGGCGGGAA TACGGCTGGC TCGGGAGCCC GCAATTGGGC AGTTTCGGAG
CCGAATCTTT TGAATGTAGC GGCAACGCGC GCCAAACGAC GCCTCTATGT GATTGGCGAC
AGAAACGACT GGAAGAATCG AGCGTTGTTT TGTGATGTCA TGGATCTGTT ACCACTGCAG
ACCACTTCGG AGCGCGAGCA GGAACAGATG CCAATTTCCC CTTAG
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| Protein sequence | MKVEESIVRY WHAVELLQPQ SAPKLKKRSS SYGAFIHNTP IGNPIPPWST ASIVAKQKLP
KRRVWSHTLF AHIYDSRRIT EHLKEVYGAD QGYREPQYRE SALFAAKFTM TGQFVDDSFV
LSSEAWFLGR VLTGKDWTRG FEEDQTAIGD HVKVLFEGQV SSGALRELTH WILQYIGVAG
FFGDMDGHVF RFRSQPVNPN KPESEDDPLN SFLLDDLANV ADSIIKGGKS NPLDQYLYRH
DARLRLQIDN DRESLPLIDR LMPDAYPTSC WPSEQHLGLV HSQQLAVNTI LATLGNGQGL
LGINGPPGTG KTTLLRDLIA TIVTSRADVL AKLPRASDGF VRNGREAAND GGKEQSCFKL
DPALYGFEIV VASSNNGAVE NVTLELPQRD KIDESWLPEA EYFAELGELV SGKPAWGLIS
GALGSKTRRT KFVERYFYGQ RPFGSDDKAD PDAEDEAELD DEFGDAVNTL FSTPSTVEEK
FGASEESDEA PADKEEGPKG FLGWLSACAE VNKTRSPEQR QALWQEAIAD YEAAKTEVRR
TCAAANRIRE LIQALCKTRK QVAEQSEALR TLESKLADAV NQLSRLDAEE NRPASMALKQ
CLYELEVHQA RKPGFWAKVF SFWGAQRDWD AKRKRLESHH DLAKSEFSRI ARLTKQLGAS
RESLEKHTAD TRRALQRLRS QCQAHMQDAI DVAREGQADH LLAWLEDGAI GRGDAIELAE
PWRFEGWRQA RARVFIQALK LHRVFFELEA SRMRSNLFLI NGMLTGTRYH GISRDAIRSA
WASLFMVVPV LSSTFASFAR SFGSLGGGDI GWLLVDEAGQ ASPQAAVGAL WRSRRALLVG
DPLQLKPIVT VSDAVLEHMR TRYQVDTHWL PNRQSAQTLA DEATRWGRMA GPTDGKTWVG
LPLVVHRRCD KPMYALANRI AYDGAMVYGT LTPRPDKETP ASFLTGWIQA SGASQDNWVP
AEGKALQDLL TLLHRDGVKA EDIAVITPYK AVQENLKSML SDKMISGTIH TMQGKEAPIV
ILVLGGNTAG SGARNWAVSE PNLLNVAATR AKRRLYVIGD RNDWKNRALF CDVMDLLPLQ
TTSEREQEQM PISP
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