Gene Shewana3_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1246 
Symbol 
ID4477166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1460354 
End bp1460659 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content57% 
IMG OID639725801 
Producttranscriptional regulator-like protein 
Protein accessionYP_868887 
Protein GI117919695 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGCA AAATCATTGA ATCCCTGCGC GGTGACCTGG ACGCATTGCA CAACGCTGGC 
GCAATCAGCA AGGTGACGAT GCGCGAGTTT GACGAGATCT GTCCGCCGCC AGTACGCGAG
TTCAGTGCTG ACGACATTAA ACGTCTGCGT GAGGGACTGC ACTTCAGTCA GCCAGTGTTC
GCTCATCATC TGCACACCAC CGCCTCGACG GTGCGCAAGT GGGAACAAGG CGAAACGCGT
CCAGCCGGTC CTGCGCTCAA GCTGCTTAAT GTCATCGCCG ACAAAGGCTT GCAGGCCATT
ATCTGA
 
Protein sequence
MTSKIIESLR GDLDALHNAG AISKVTMREF DEICPPPVRE FSADDIKRLR EGLHFSQPVF 
AHHLHTTAST VRKWEQGETR PAGPALKLLN VIADKGLQAI I