| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1239 |
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| Symbol | |
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| ID | 4477159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1448713 |
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| End bp | 1450149 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725794 |
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| Product | putative transglycosylase |
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| Protein accession | YP_868880 |
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| Protein GI | 117919688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAT TTCTGTTCGC GATTATCTTA GGTTTCTTAC TGACGGCTTG TCAGCAAGTG
ACCGTGGAAG AAACAGAATA TGTCCCCCAT AAACTCACCG AATTAAGGGT CGGCACCCTT
TATGGCCCGC AAATTTATAT GACCTCGGGC CAAGGCAACA GCGGCTTCGA TTACGATATG
GCAGTGCTCT TTGCCGAGTA TCTCGATGTG CCCTTAAAAA TGGTGCCCTA CACCAACCGT
GCCGAACTCT ATGATGCACT TAAAAAAAAC GAGATTGATA TTATTGCCGC GGGGATGACT
GAAACCCCAG CGCGGCGCGA ACAATTCCGT TTAGGCCCGC CGCTGTATCG CGTCAATCAA
GTACTGGTTT ACCGTGAAGG CATGCCAACA CCCAAAGATA TCACTGACTT AAAAGGCAAA
ATTACTGTAA TTGCCGACTC TTCTTTTGTG GAAACCTTGA CGCAATTACA GAAACGTCAT
CCGACGCTGG TGTGGGATCA AGTCACAGAT AAAGACAGCG AAGAGCTGCT GGCGATGATC
GCCAACAAGG AAATCGACTA CACCATCGCC GACTCGAGCA GCGTGCAGAT TAACCGCCGC
TATTTACCGG ATCTACGTTC GGGGCTCGTG CTAGAAGAAA AGCTCGATGT GGTTTGGTTG
CTCCCCCCCA CACACAGTGA CGGCTTGATG AGTCAGTTAT TGGCGTTTTG GCACCAAGAA
AAACTCGCCG GTACCCTCGA TCATCTTAAT GAAAAGTACT TTGGCCACGT TAAGCGTTTC
GACTATATCG ATACCCGCGC CTTCCTGCGC GCCATCGAAA CCGTATTGCC TCGTTATCGT
CAGCTTTTCG AAACCCACGC TGGTGACTTA GATTGGCGTA AATTGGCGGC AACCAGTTAT
CAAGAGTCAC ATTGGAATCC TAATGCCCGC TCACCCACTG GGGTGCGCGG CATGATGATG
TTAACGCAGC CGACCGCCAA AGAAATTGGC ATTACAAATC GACTCGATGC GGAAGAAAGT
ATTCGCGGCG GCGCCGCTTA TTTACGGGAT ATGATCAACC GTCTGCCCGA GTCTATCCCC
GAGAGTCAAC GCATGTGGTT TGCGCTGGCC TCTTACAATA TCGGTTATGC CCATGTGGAA
GACGCCCGTA AACTCGCTGA GTCCATGGAG CTGAATCCTA ACGCCTGGCG GGATCTTAAA
AAAGTATTGC CACTACTGCA AAAGCGTAAA TATTACCAAA AGACTCGCTA CGGCTATGCC
CGTGGTAGCG AAGCCGTGCA TTACGTCGAC AGCATCCGCC GTTATTACGA CACCTTAGTC
TGGGTCGATA ATCAGTCTAA ACAGCAAAAT AGCGATGAGG AAGAACCAAG CGACCTCGCC
TCGGAAGATG GCCCAGCGCC AGTGCCCGGC ACCCTCAGCC CTGATAAGCC GAAATAG
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| Protein sequence | MTRFLFAIIL GFLLTACQQV TVEETEYVPH KLTELRVGTL YGPQIYMTSG QGNSGFDYDM
AVLFAEYLDV PLKMVPYTNR AELYDALKKN EIDIIAAGMT ETPARREQFR LGPPLYRVNQ
VLVYREGMPT PKDITDLKGK ITVIADSSFV ETLTQLQKRH PTLVWDQVTD KDSEELLAMI
ANKEIDYTIA DSSSVQINRR YLPDLRSGLV LEEKLDVVWL LPPTHSDGLM SQLLAFWHQE
KLAGTLDHLN EKYFGHVKRF DYIDTRAFLR AIETVLPRYR QLFETHAGDL DWRKLAATSY
QESHWNPNAR SPTGVRGMMM LTQPTAKEIG ITNRLDAEES IRGGAAYLRD MINRLPESIP
ESQRMWFALA SYNIGYAHVE DARKLAESME LNPNAWRDLK KVLPLLQKRK YYQKTRYGYA
RGSEAVHYVD SIRRYYDTLV WVDNQSKQQN SDEEEPSDLA SEDGPAPVPG TLSPDKPK
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