Gene Shewana3_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1235 
Symbol 
ID4477155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1440107 
End bp1441573 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content50% 
IMG OID639725790 
Productinosine 5'-monophosphate dehydrogenase 
Protein accessionYP_868876 
Protein GI117919684 
COG category[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.916768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGTT TAATTAAAGA AGCGCTAACC TTTGACGATG TGTTACTTGT TCCTGCGCAT 
TCGACTGTAC TCCCAAACAC CGCCATCCTT AAAACTCGCC TGACTAATAC CATTGAACTG
AATATTCCGC TTGTGTCTGC CGCTATGGAC ACTGTGACCG AAGCGCGTCT TGCTATCGCC
ATGGCACAGG AAGGTGGCTT AGGTTTTATT CATAAAAACA TGAGCATAGA AAAGCAGGCC
GAAGAAGTTC GTAAAGTAAA AATTTACGAA GCGGGTGTGG TGCAACAACC TGTGACGGTA
ACGCCTTCAA CTACGCTGGC GGATCTTAAA GTGCTGACCG CGAAGAATGG TTTTGCGGGT
TACCCTGTGG TAAACGAAGC CAACGAATTG GTGGGTATCA TCACTGGCCG TGACGTACGT
TTCGTGACTG ACTGGAGCAA AACCGTAGAA GAAGTGATGA CGCCAAAAGC GCGTTTAGTC
ACTGTTGCGG AAGGCACTAA GTTAGATGAA GTGCAAAAAT TAATGCACTC AAACCGTATC
GAAAAAGTGT TAGTTGTCGA CGATAACTTC AAGCTGAAAG GCTTAATCAC AGTAAAAGAC
TTCGAAAAAG CTGAGCGTAA GCCGAATGCC TGTAAAGACG AATTAGGTCG TTTACGTGTG
GGCGCCGCCG TAGGTGCTGG TGCTGGTAAC GAAGAGCGTG TCGATGCGCT GGTGAAAGCC
GGTGTTGACG TGCTGCTGAT CGATTCTTCT CACGGCCACT CTGAAGGCGT GTTGCAACGT
ATCCGTGAAA CCCGCGCTAA ATACCCAGAA CTGCAAATCA TCGGTGGTAA CGTGGCAACA
GCTGAAGGCG CATTAGCCCT AGTTGAAGCT GGCGTTAACG CGGTTAAAGT GGGTATTGGC
CCTGGTTCTA TCTGTACCAC ACGTATCGTG ACGGGTGTGG GCGTGCCACA AATTACCGCA
GTGTCTGACG CTGCCGAAGC TGTAAAAGGT TTAGGGATCC CAGTTATCGC CGACGGCGGT
GTGCGTTTCT CCGGTGACTT AGCCAAAGCC TTAGCCGCAG GTGCATCATG CATCATGGCG
GGTTCAATGT TTGCGGGTAC CGACGAAGCG CCGGGCGAAA CCGAACTCTA CCAAGGCCGT
GCCTATAAGT CATACCGCGG TATGGGTTCT TTAGGCGCCA TGTCTCAAGG TTCTTCTGAC
CGTTATTTCC AATCTGATAA TGCTGCCGAC AAGCTGGTGC CAGAAGGCAT TGAAGGTCGT
GTACCTTACA AAGGCAAGCT TAAGGAAATC ATCCATCAGC ATATGGGCGG TCTGCGTTCA
TGCATGGGCT TAACAGGCTG TGCCACGATC CAAGAACTGA ACGAAAAAGC GCAGTTTGTG
AAAGTAACGT CTGCGGGCAT GGGCGAGTCC CACGTTCACG ATGTGACCAT CACTAAAGAA
GCGCCAAACT ACCGTTCAGG TGCGTAA
 
Protein sequence
MLRLIKEALT FDDVLLVPAH STVLPNTAIL KTRLTNTIEL NIPLVSAAMD TVTEARLAIA 
MAQEGGLGFI HKNMSIEKQA EEVRKVKIYE AGVVQQPVTV TPSTTLADLK VLTAKNGFAG
YPVVNEANEL VGIITGRDVR FVTDWSKTVE EVMTPKARLV TVAEGTKLDE VQKLMHSNRI
EKVLVVDDNF KLKGLITVKD FEKAERKPNA CKDELGRLRV GAAVGAGAGN EERVDALVKA
GVDVLLIDSS HGHSEGVLQR IRETRAKYPE LQIIGGNVAT AEGALALVEA GVNAVKVGIG
PGSICTTRIV TGVGVPQITA VSDAAEAVKG LGIPVIADGG VRFSGDLAKA LAAGASCIMA
GSMFAGTDEA PGETELYQGR AYKSYRGMGS LGAMSQGSSD RYFQSDNAAD KLVPEGIEGR
VPYKGKLKEI IHQHMGGLRS CMGLTGCATI QELNEKAQFV KVTSAGMGES HVHDVTITKE
APNYRSGA