| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1232 |
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| Symbol | |
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| ID | 4477152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1435755 |
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| End bp | 1436942 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725787 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_868873 |
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| Protein GI | 117919681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAGAA CCTGCTAGCC GCTGGGTTAA GCCTAGCCAT GTTATCCGCC
TGTTCTTCTA GCGATGTAGA AGAAGAACCG GTAAGTGAGT TAACTGCGAT TCAGGCGACA
GTGTTTCCTG AAGTAAGTTG GAGCGCCTCT GTAGGTGACG GTGTCGGTGA TTATTACTCT
CGCCTCACTC CTGCAGTTCG TTACGGTAAA ATTTTTGCAG CCGACCGCTA CGGCGAAGTC
GTGGCCTTTG ATGAAGCCAC GGGTGAGCGC GTTTGGAAGA AAGATTTTAG TGAAGAGTTT
CGCGATAACG CCTTAGCCAA AAACAAGGGC GCACGCTTAG CCGCAGGTGT TACTGCCGCG
CGCAATAAAA TCTTTGTCGG TGGAGAGAGT GGTCTTTTGG CCGCGCTGAA TGCCGAAGAT
GGTCAAGTGC TGTGGCATGT CGTGACTGGG GGGGAGTTAC TCTCTAAGCC AACCGTTGCT
GACGATGTGG TGGTGGTGAG CACGAGCTCT GGCGCCCTCG AAGCCTTTAA CGTCGATACG
GGCGCTAAGC TGTGGGCCTA TGAGATGCAG TTGCCTAATC TGACCTTACG TGGCACAGGT
TCTGCGGCCT ATGAAGCGGG TGGTTTCTTT ATCGGGACCG CCGATGGCAA AGTCGCAGTT
GTGGTGAAAA ACAATGGACA AGCCGCATGG GAACAAGCGA TTTATAATCC AACTGGCGGC
AATGAGTTTA CTCGTATGGC CGATGTGGAT ATGACGCCGC TGATCTTAGG TGACAACCTT
TATGCGGTGA GCTACAACGG TAACTTGGTG TCGATGGAAC TGCGTACCGG ACGTGTGATT
TGGACGCGTA AGTACTCCAG CTTCAATGAG TTAGCGTCTG CAGGTTTAAG CTTATTCCTA
GTCGATGATC ACAGCCGTAT CTACTCTGTG GACAGACGTA ACGGCTTAGA ATTGTGGAGC
AACTCTGAGC TGGCAAACCG TACACTCACG TCACCAGCCG TATATCGCGA CTATCTGGTC
GTGGGCGATT TTGAAGGTTA TCTGCACTTT ATTGACCGCA GCACAGGCAG TATTGTCGGT
CGTATCCAAG TGGACAGCTC TGGATTATTC AGCCAGCCAT TAGTGGTGGA TGATAAAATC
TACGTGCAAG GTCGCAGCGG AAAGTTAGCT GTTGTAACAC TTCCTTAG
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| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEEEP VSELTAIQAT VFPEVSWSAS VGDGVGDYYS
RLTPAVRYGK IFAADRYGEV VAFDEATGER VWKKDFSEEF RDNALAKNKG ARLAAGVTAA
RNKIFVGGES GLLAALNAED GQVLWHVVTG GELLSKPTVA DDVVVVSTSS GALEAFNVDT
GAKLWAYEMQ LPNLTLRGTG SAAYEAGGFF IGTADGKVAV VVKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRVI WTRKYSSFNE LASAGLSLFL
VDDHSRIYSV DRRNGLELWS NSELANRTLT SPAVYRDYLV VGDFEGYLHF IDRSTGSIVG
RIQVDSSGLF SQPLVVDDKI YVQGRSGKLA VVTLP
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