| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1229 |
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| Symbol | ispG |
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| ID | 4477149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1432558 |
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| End bp | 1433673 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725784 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_868870 |
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| Protein GI | 117919678 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.809555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAACG AAACACCCAT AAAGAGACGT CCTTCAACTC GCATTTATGT GGGCAATGTG
CCGATTGGTG ATGGTGCGCC GATTGCCGTA CAGTCGATGA CTAACACTAA GACCACAGAT
GTTGAGGCAA CCGTTGCCCA AATCCGTGCC CTAGAAAAAG TGGGTGCCGA TATTGTGCGT
GTCTCTGTGC CGACCATGGA CGCCGCCGAA GCTTTTAAAG TGATTAAGCA ATCGGTATCT
GTGCCCTTGG TTGCGGATAT CCATTTCGAT TACCGTATCG CCTTAAAAGT GGCGGAATAT
GGTGTGGACT GTTTGCGTAT CAACCCCGGC AATATTGGTA ACGAAGAGCG TATCCGCAGT
GTGGTGGAGT GCGCCCGCGA CAAAAACATT CCTATCCGTA TTGGGGTGAA CGGCGGTTCA
TTAGAAAAAG ATCTGATGGA CAAATACAAA GAGCCCACGC CAGAAGCCTT ACTCGAATCG
GCCATGCGCC ATGTGGATAT TCTCGACCGT TTGAACTTCG ACCAATTTAA GGTCAGCGTA
AAAGCCTCCG ATGTGTTCTT AGCTGTAGAA TCTTATCGTT TATTGGCCAA ACAAATTCGC
CAACCATTGC ATTTAGGTAT TACCGAAGCG GGTGGTGCCC GTGCGGGGGC GGTGAAATCA
GCCGTTGGCT TAGGTATGCT GCTTGCTGAA GGCATTGGTG ATACGCTGCG TATTTCCTTG
GCGGCCGACC CGGTGGAAGA AATCAAAGTT GGCTTTGATA TCCTAAAGTC ACTGCGTATC
CGTAGCCGTG GTATTAACTT TATTGCCTGT CCTTCTTGCT CGCGCCAAGA GTTCGATGTG
ATCAGCACGG TAAATGAATT AGAGCGCCGC CTCGAAGATG TGACGACCGC GATGGATGTG
TCTATCATCG GCTGTGTGGT CAATGGTCCA GGCGAAGCCT TAGTGTCACA CATTGGCTTA
ACGGGTGGAC ATCGTAAGAG TGGTTACTAC GATGAAGGCG AGCGTCAAAA AGAGCGTTTC
GACAATGACA ACTTAGTCGA TTCCCTCGAG GCGAAAATTC GCGCTAAGGC GAGCCAAATG
GCCAATCGCA TCCAAGTGAA AGACACGACT GAGTAA
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| Protein sequence | MYNETPIKRR PSTRIYVGNV PIGDGAPIAV QSMTNTKTTD VEATVAQIRA LEKVGADIVR
VSVPTMDAAE AFKVIKQSVS VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRS
VVECARDKNI PIRIGVNGGS LEKDLMDKYK EPTPEALLES AMRHVDILDR LNFDQFKVSV
KASDVFLAVE SYRLLAKQIR QPLHLGITEA GGARAGAVKS AVGLGMLLAE GIGDTLRISL
AADPVEEIKV GFDILKSLRI RSRGINFIAC PSCSRQEFDV ISTVNELERR LEDVTTAMDV
SIIGCVVNGP GEALVSHIGL TGGHRKSGYY DEGERQKERF DNDNLVDSLE AKIRAKASQM
ANRIQVKDTT E
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