Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1228 |
Symbol | |
ID | 4477148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1431388 |
End bp | 1432515 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725783 |
Product | hypothetical protein |
Protein accession | YP_868869 |
Protein GI | 117919677 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0193476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCAGTAG CCGCGAGTGA AGCTGAATCG ACGCCTGATG TAACGCTCGG CACTGTACTC AGAACGGCTC GTGAGCAGAT GGGCTTAAGC ATTGCGGATA CCGCGGTGAA GTTACATCTG CGCCCAGGGA TTGTTGAAAA TCTCGAAGCC GACGATTTTT CCAATATTTC TTCTTCGACT TATGTTCGCG GATACGTCAA AAACTATGCC CGCATGCTGG GGGTGGATAA CGCCCTGATT GAGGCATGCC TAGCGCGGCA GGTGCCGTTA GTGACGCAGC CTGCCATGCA AAGCTTTTCC CGCAAGACGA CCTATCAAGC TCGTGACACT AAATTAAAGT GGCTGAGCTT TTTTATTGTC ATCGTGTTAT TGGGCCTGTT CGTCCTGTGG TGGATGCAAC GAACCACGCT AGTGACCCAT GTTGATGTGT CTCAACCGAC GGCGGAAGAG TTAGCTGCGG CGAATCAAAC CTTGCCGGGG GATGTTTTGC TGACGGAAAC TGACGCGAGC GAGCGCTTAA GCGAGATTGC GGTCAATGGC TCAATGGCGA CCGATGGTCC GATAAAAGAT ACCGATGAGA GCACTATCGA CCCGAATATG AACGATACGG CGGCGATGGA AGTAGAGCAG ACGCCTGCCA ATTCGGCTGT GAATCCGAGC GGATCTAACA ACGCTCTGAC GAACAATGCT TCTAACACAG CACCGAGCTC TGCAGCGAGT AATGCCGTTG CGATTCCAAA CGTTACACAA AACGCAGCGA CCAATACCGC CCCAGAGCAG AACCCATCCG CATCGAATGC ACCAGCAACC AATACTGCGT CGACAGCGCA AGCCATGCCA GTAGCCGCAG GGCAGTCGAG CATTACTATT GAGCTCACGG GCGATTGCTG GATCAACATA GTCGATGCCA AGGGCAAAGC GATTGTCGAC GGTGTCCGTG GGGCTGGTGC GAATATTCAA GCCAGTGGTG TGCCTCCGTT TAAAGTGATC CTAGGCGCTC CCACTGTTGT GTCCACGTTT ACGGTCGATG GTAAAGCCAT CAGCCTTGCT GAATTTCCTA AGGGTCGTGT TGCGCGTTTG ACTATCCCAC AGGTTTAA
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Protein sequence | MKDNEINASV EPVAASEAES TPDVTLGTVL RTAREQMGLS IADTAVKLHL RPGIVENLEA DDFSNISSST YVRGYVKNYA RMLGVDNALI EACLARQVPL VTQPAMQSFS RKTTYQARDT KLKWLSFFIV IVLLGLFVLW WMQRTTLVTH VDVSQPTAEE LAAANQTLPG DVLLTETDAS ERLSEIAVNG SMATDGPIKD TDESTIDPNM NDTAAMEVEQ TPANSAVNPS GSNNALTNNA SNTAPSSAAS NAVAIPNVTQ NAATNTAPEQ NPSASNAPAT NTASTAQAMP VAAGQSSITI ELTGDCWINI VDAKGKAIVD GVRGAGANIQ ASGVPPFKVI LGAPTVVSTF TVDGKAISLA EFPKGRVARL TIPQV
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