Gene Shewana3_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1228 
Symbol 
ID4477148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1431388 
End bp1432515 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content53% 
IMG OID639725783 
Producthypothetical protein 
Protein accessionYP_868869 
Protein GI117919677 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0193476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCAGTAG CCGCGAGTGA AGCTGAATCG 
ACGCCTGATG TAACGCTCGG CACTGTACTC AGAACGGCTC GTGAGCAGAT GGGCTTAAGC
ATTGCGGATA CCGCGGTGAA GTTACATCTG CGCCCAGGGA TTGTTGAAAA TCTCGAAGCC
GACGATTTTT CCAATATTTC TTCTTCGACT TATGTTCGCG GATACGTCAA AAACTATGCC
CGCATGCTGG GGGTGGATAA CGCCCTGATT GAGGCATGCC TAGCGCGGCA GGTGCCGTTA
GTGACGCAGC CTGCCATGCA AAGCTTTTCC CGCAAGACGA CCTATCAAGC TCGTGACACT
AAATTAAAGT GGCTGAGCTT TTTTATTGTC ATCGTGTTAT TGGGCCTGTT CGTCCTGTGG
TGGATGCAAC GAACCACGCT AGTGACCCAT GTTGATGTGT CTCAACCGAC GGCGGAAGAG
TTAGCTGCGG CGAATCAAAC CTTGCCGGGG GATGTTTTGC TGACGGAAAC TGACGCGAGC
GAGCGCTTAA GCGAGATTGC GGTCAATGGC TCAATGGCGA CCGATGGTCC GATAAAAGAT
ACCGATGAGA GCACTATCGA CCCGAATATG AACGATACGG CGGCGATGGA AGTAGAGCAG
ACGCCTGCCA ATTCGGCTGT GAATCCGAGC GGATCTAACA ACGCTCTGAC GAACAATGCT
TCTAACACAG CACCGAGCTC TGCAGCGAGT AATGCCGTTG CGATTCCAAA CGTTACACAA
AACGCAGCGA CCAATACCGC CCCAGAGCAG AACCCATCCG CATCGAATGC ACCAGCAACC
AATACTGCGT CGACAGCGCA AGCCATGCCA GTAGCCGCAG GGCAGTCGAG CATTACTATT
GAGCTCACGG GCGATTGCTG GATCAACATA GTCGATGCCA AGGGCAAAGC GATTGTCGAC
GGTGTCCGTG GGGCTGGTGC GAATATTCAA GCCAGTGGTG TGCCTCCGTT TAAAGTGATC
CTAGGCGCTC CCACTGTTGT GTCCACGTTT ACGGTCGATG GTAAAGCCAT CAGCCTTGCT
GAATTTCCTA AGGGTCGTGT TGCGCGTTTG ACTATCCCAC AGGTTTAA
 
Protein sequence
MKDNEINASV EPVAASEAES TPDVTLGTVL RTAREQMGLS IADTAVKLHL RPGIVENLEA 
DDFSNISSST YVRGYVKNYA RMLGVDNALI EACLARQVPL VTQPAMQSFS RKTTYQARDT
KLKWLSFFIV IVLLGLFVLW WMQRTTLVTH VDVSQPTAEE LAAANQTLPG DVLLTETDAS
ERLSEIAVNG SMATDGPIKD TDESTIDPNM NDTAAMEVEQ TPANSAVNPS GSNNALTNNA
SNTAPSSAAS NAVAIPNVTQ NAATNTAPEQ NPSASNAPAT NTASTAQAMP VAAGQSSITI
ELTGDCWINI VDAKGKAIVD GVRGAGANIQ ASGVPPFKVI LGAPTVVSTF TVDGKAISLA
EFPKGRVARL TIPQV