| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1227 |
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| Symbol | |
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| ID | 4477147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1430603 |
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| End bp | 1431391 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725782 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_868868 |
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| Protein GI | 117919676 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.023902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATG GATTGTCAGG GTTATCATTA GCAATTGCCC TGTCATTATT AGTGACAGGA
TGCGTAACTG AGCGTACCTA TTCAGGGACT GATATTCCCG TGTCGGAGCG AAAACTCGAT
AAAGTTGCCG CCGCACGGGA GCGTATGCAG CTCGGTTTAA CCTACCTTAA TCGAGGTAAC
TCGGAACAAG CCAAATACAA TCTTGATAAA GCCGTTGAAT ATGCGCCAGA GCTCGAAGAT
GTGCATGTGG CCATGGCCTA TTACTATCAA ACCGTTGGCG ATTTAGTACG TACCGAACAG
GCGTATCAAG ACGCTATCAA TACTAAGGAC GCCTCTGGCG ATTCCATGAA CAACTTTGGG
GTGTTTTTGT GCCAACAAAA GCGATACGAC AAAGCTGAAA AAATGTTTTT GGCCGCGATA
GAAATGCCCA AATATACGCG TACCGCGTCC AGTTATGAAA ACTTAGGCAT TTGCAGCCGA
GACGCGGGAC AAACAGAAAA GGCACGACAG TATTTTCAGA TGGCGTTAAA GTATGACCCG
AGACGCTCGG TGTCTTTACT GGAGCTGGCT GAGCTTGGGG TAGAGAAAGG TGATTATGTC
GATGCGCAAA ACCAATTAGC GCGTTATCAC CAAGTGGCAG CCCAAACTCC AGAGAGTTTA
ACGCTCGGAA TAAAAATTGA GCAGGCGTTG AATGATGATG CTGCTATGAA GCGATTTGGC
ATTTTATTGC TCGCCAAATT CCCAGCATCG CCTCAAGCCA AGCAATACAG AGTTAATTTG
CATCAATGA
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| Protein sequence | MKHGLSGLSL AIALSLLVTG CVTERTYSGT DIPVSERKLD KVAAARERMQ LGLTYLNRGN
SEQAKYNLDK AVEYAPELED VHVAMAYYYQ TVGDLVRTEQ AYQDAINTKD ASGDSMNNFG
VFLCQQKRYD KAEKMFLAAI EMPKYTRTAS SYENLGICSR DAGQTEKARQ YFQMALKYDP
RRSVSLLELA ELGVEKGDYV DAQNQLARYH QVAAQTPESL TLGIKIEQAL NDDAAMKRFG
ILLLAKFPAS PQAKQYRVNL HQ
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