Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1226 |
Symbol | |
ID | 4477146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1429449 |
End bp | 1430570 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725781 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_868867 |
Protein GI | 117919675 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.173043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT GCGGATCTGG GTGAGAAGCC TTTCCGTGCC GATCAGCTGA TGAAATGGAT CTATCATTTC GGTGTCAGTG ACTTCGAAGA GATGACTAAC ATCAACAAAG TGTTACGCCA AAAACTGGCG GCGCGCTGTG AGATTGTGGC GCCTGAGATT TCTAGCTATC AAAAATCCAC CGATGGCACA ATTAAGTTCG CCATCCATGT CGGCGAAGGC CAAGAAGTTG AAACCGTATA TATTCCTGAA GATGACCGCG CCACCCTGTG TGTGTCGTCT CAAGTGGGCT GCGCCCTCGA ATGTACTTTC TGCTCGACCG CACAGCAAGG CTTTAACCGC AACTTAACTG TCTCTGAAAT TGTCGGTCAA ATTTGGCGTG TTTCCCACTT CTTAGGGTTC GCCAAAGAAA CCGGCGAGCG CCCAATCACC AACGTGGTGA TGATGGGCAT GGGTGAACCG CTGCTTAACC TTGCCAACGT GATCCCTGCG ATGGATATCA TGCTGGACGA CTTCGGCTTT AGCCTGTCAA AACGCCGTGT GACCCTGTCA ACTTCGGGCG TAGTGCCAGC ATTAGATAAA CTCGGTGATG CCCTCGATGT GGCGCTGGCC GTGAGTATCC ATGCGCCAAA CGATGAACTG CGCGATATTC TGGTTCCCGT AAATAAAAAG TATCCGCTGC AGGAATTCCT CGCGGGAATT CGCCGTTATA TCGCTAAATC TAACGCTAAC CGTGGCCGCG TGACTGTGGA GTATGTGATG CTCGATCACA TCAACGACAG TACTGAACAA GCCCATGAAT TAGCACAATT AATGAAGGAT ACGCCCTGCA AGGTTAACCT GATCCCGTTC AACCCATACC CAGGCTCGCC CTATGGTCGC TCGTCAAACT CGCGCATCGA CCGTTTTTCT AAGGTATTGA TGGAATATGG CTTAACCGTG ATTGTACGCA AAACCCGTGG TGATGATATT GACGCGGCCT GTGGACAGTT AGCGGGTGAT ATTCGCGATC GAACCAAGCG TTTAGCAAAA AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
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Protein sequence | MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA ARCEIVAPEI SSYQKSTDGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKETGERPIT NVVMMGMGEP LLNLANVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KRMQENQISV TMN
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