| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1225 |
|---|
| Symbol | |
|---|
| ID | 4477145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1428213 |
|---|
| End bp | 1429304 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639725780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868866 |
|---|
| Protein GI | 117919674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.736158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACCC TCATCATTAT AGTGCTTGTC GCTGTCGGAG TTTCTTTTCT GTGCAGTGTA
TTCGAAGCAG TGTTGCTCTC GGTTACCCCT AGTTATATCG CCTCGCTCGA ACAAACTGAC
AGTGCCGCGG CCGCCCGGTT GCGTAAACTA AAAGAAAACA TCGAAGCGCC TCTCGTGTCT
ATTTTGACCC TAAACACCAT TGCCCACACT GTGGGTGCCG CCGTTGCAGG TGCGCAAGCG
GCCAAGGTCT TTGGTGATGA CATGCTCGGC GTGTTCTCCG GAGTGTTAAC TTTTATCATC
CTATTCTTCT CAGAGATTAT TCCGAAATCT GTGGGAGCCA ATCACTGGCG CCGTTTAGCC
CCGAGTGTAT CGATTGCCAT CACTTGGATG AAGCGTGTCA CTAAGCCGCT GATTTGGATG
TCGCAACAGG TGACTCGCCT GCTAGGTAAA GGGGAAGAAG GTCAGTACAT TCGCCAAGAA
ATGAGCGCCA TGGCCAAGAT TGGTCACGAA TCCGGTGAGT TAGACGAGCA AGAGTCTAAA
ATTTTGACCC AAATGCTCAA GGTGCGTGAC GTGCCTGTGA CGGCGATTAT GACGCCGCGT
ACCGTGATGT TCTCGTTACC CGTTTCACTG ACGCAAAATG AGTTTGTGCA AGAATATCGC
GACAAACCTT TTACCCGTAT TCCGGTATAC GATCAGGACC ACGACGACAT TATCGGTTAC
ATCACCCGTA CCGATGTTTT GCTGGCTGAG CGTTACACCC CTGATGCACC GATTGGTGAA
CTCAAGCGCA GCCTATTTGT GGTGCCCGAG ACGGCTAAAA TCCTGCCGTT ATTCGAGCGG
ATGATTAAAC GCAATACCCA AATTGCGATG GTGGTTGACG AATACGGCAG TAGCCAAGGT
ATTGTGACCC AAGAAGACAT TATCGAATCG CTACTTGGCT TAGAGATTGT CGATGTGAAT
GACCCTGCGA CCGATATGCA GCAATTGGCC CGTAAACTCT GGACCAAACG CATGAAGCAA
AAAGGCATTC GTCTCTCCGA TGATGGCGAC TTCGAAGCCG CCGCCGAAGA TGACGAGGCG
CGCTCGGGTT AA
|
|---|
| Protein sequence | MLTLIIIVLV AVGVSFLCSV FEAVLLSVTP SYIASLEQTD SAAAARLRKL KENIEAPLVS
ILTLNTIAHT VGAAVAGAQA AKVFGDDMLG VFSGVLTFII LFFSEIIPKS VGANHWRRLA
PSVSIAITWM KRVTKPLIWM SQQVTRLLGK GEEGQYIRQE MSAMAKIGHE SGELDEQESK
ILTQMLKVRD VPVTAIMTPR TVMFSLPVSL TQNEFVQEYR DKPFTRIPVY DQDHDDIIGY
ITRTDVLLAE RYTPDAPIGE LKRSLFVVPE TAKILPLFER MIKRNTQIAM VVDEYGSSQG
IVTQEDIIES LLGLEIVDVN DPATDMQQLA RKLWTKRMKQ KGIRLSDDGD FEAAAEDDEA
RSG
|
|---|
| |