Gene Shewana3_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1224 
Symbol 
ID4477144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1426364 
End bp1428115 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content51% 
IMG OID639725779 
Productmetallophosphoesterase 
Protein accessionYP_868865 
Protein GI117919673 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.618653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG GATACACACT CTCACTCGCG CACATCAACG ATACCCATTC GAATTTTGAG 
CCCAGCCGCG TACAATTTTC CTTCAATCTC GGGCTTAAAG CCTTAGATAT CACCAGTCAC
AGCGGTGGCT ATGCGCGCCT GGGGTATCAG ATTAGTCAGG CACGTGACCG AGCCGCACAA
AGCCAAATGC CGTTTTTATT TTTGCATGGG GGTGACAGTT TCCAAGGCAC GCTGTATTTC
AGCCATTTTA AGGGTAAGGC CAACGCCCAT TTGCTGAATT TACTCTCACC CGATGCCATG
GTGATTGGTA ATCACGATAT TGATGAAGGC AATGCGCGGC TCGCCGAATT TGCTAAGCAA
ATCGATTTTC CGCTGCTGGC AGGCAATATG GACTTAAGCC AAGAGGATAT CCGCAAGCCG
GGTAACCTGC GTACTGTGGC GAATATTCTG GCCTATGATG AAAAAAACCA ACTTGCCAGC
TACCTCGAAA AGCCCTTCTA CGACAAAAAG CTCGCTATCA TCGGCATTAC TCTGGATCAG
ATGAAAAACA TCGCCAGACC CGATCCCGAC ACTCACTTTG TCGATGCGAT TGCGACCACG
GCGCGCACAG TCGCGCATCT GCATGCCAAA GGCATCAAGC ACATTATCGT ACTGAGTCAC
TTAGGTTTAG ATCAGGACAA AAGGCTTGCA GAACAAGTCG ATGGCATCAG CCTTATCGTC
GGTGGCCATA CCCATACATT GCAGGGCGAT TTTAGTGCCT TGGGGTTAAG CAATATACCC
TATGGTGAAA CCATCCATGG CACTCCTATC GTTCATGCGG GGAAATACGC CGAAACCTTA
GGCTTGGCCG AGATTGAATT TGATGCAGCG GGCCGCGCGA TAAGCCTAAA AGGTGGCAAC
TATTTTATGC TCGATAAGCA GTTTATGTTG AGTTCGAGTG AGCAAGTGGA TGACACTGAC
TATCGAGCCG TGCAGCAACG CTTTAATGAG CATCCCTATG TATTGTGGGA TGATGCCGAT
GAAGACATTC ACGGTGTGAT CCAAGATATC TATCGCCCCG CGATTGCCGA GATGGAAAAC
AAAGTCTTAG CCCTTGTGCC TAAGAATCTA GTGCATACCA GGCTGCCTTC TAAGGCATTA
CCCCATGGCA GCGAAATCGC CCCTTGGGTG AGCCGCAGTA TGTTCCAAGA GGCCAAACTT
GAAGATCCTC GCATCCACTT TGCCCTGCAT AACGCGGGCG GAGTGAGACA ATCTGTCGCC
CAAGGCAGGC TCACCCTCGC CGATGTGTTG GGCCAATTGC TCCCCTTCGA ATTGCCATTA
GTCAAATACG AAATCCAAGG CCAGTATTTA TACCAAGCGC TGGAATCGGC GATTAACGCC
GCGACAAACA ACAGTGTGCG CGGCACCGGT GCGGGCAGCT TCCCCTATAC CTACGGATTG
CGTTATTACT ACGATGGTAG ACGCCCATTA GGGGAGCGTT TGTTCAAGCT TGAAATGATG
CAGCAGGATG GCTTATCGCT CTGGTATCCA GTGCAACCCA ATGCACTCTA TGTGGGGGTT
TCTACCTCTT ATACCGCTGC GGGGAAAGAA GGCTATCACC CACTGTTACA GGCGCGCTGG
CAGGAATCGA TTGAGACGCT CACCCTACCC CAGGCCTTTA TTCGCTTCCT CAATCGAGCG
CCCAACCCCA ATTTAGCGGA TTTGCTCTCG CCCCATGTGC ATTACACCAG CCATGTAAAG
CGCTCGGTGT AA
 
Protein sequence
MTQGYTLSLA HINDTHSNFE PSRVQFSFNL GLKALDITSH SGGYARLGYQ ISQARDRAAQ 
SQMPFLFLHG GDSFQGTLYF SHFKGKANAH LLNLLSPDAM VIGNHDIDEG NARLAEFAKQ
IDFPLLAGNM DLSQEDIRKP GNLRTVANIL AYDEKNQLAS YLEKPFYDKK LAIIGITLDQ
MKNIARPDPD THFVDAIATT ARTVAHLHAK GIKHIIVLSH LGLDQDKRLA EQVDGISLIV
GGHTHTLQGD FSALGLSNIP YGETIHGTPI VHAGKYAETL GLAEIEFDAA GRAISLKGGN
YFMLDKQFML SSSEQVDDTD YRAVQQRFNE HPYVLWDDAD EDIHGVIQDI YRPAIAEMEN
KVLALVPKNL VHTRLPSKAL PHGSEIAPWV SRSMFQEAKL EDPRIHFALH NAGGVRQSVA
QGRLTLADVL GQLLPFELPL VKYEIQGQYL YQALESAINA ATNNSVRGTG AGSFPYTYGL
RYYYDGRRPL GERLFKLEMM QQDGLSLWYP VQPNALYVGV STSYTAAGKE GYHPLLQARW
QESIETLTLP QAFIRFLNRA PNPNLADLLS PHVHYTSHVK RSV