Gene Shewana3_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1210 
Symbol 
ID4477130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1414699 
End bp1415238 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID639725765 
Producthypothetical protein 
Protein accessionYP_868851 
Protein GI117919659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.250708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTT TCACTCGCAC GGAGCGTAGC TCCAATTTGG CTCGCACTCG CCAACGTCTT 
GCACTGTTCA GCGCTAGCCT GTTAATGCTT GGCGCCCTAT GTTTTCATCC ACAAACCGTC
ATTGCTAACG AACAAGTTGC AACAACGCTT AGCGATGAGC AAGCGGCCGC TCAAGTGCTG
GATAAATTGA ATCAATATTC GAGTAGTGCC GATTGGGACA AGTATTTTGC CCTCTATCGT
CAGGATGGTA TTTTTATTGG AACCGATGCG ACAGAGCGTT GGGGCATGGC CGAGTTTGAA
CGCTATTCAC GCCCGACCAA AGGTTGGCGC TACGATTTAA CCAGCCGCCA TTTAGTGCAG
CATGGTGATG TGATCCTGTT CGATGAACTG CTCAACAGCC CTAGTTATGG CGTGAGTCGA
GGGACAGGCA CCCTAATTAA AACCAATGGG GAATGGAAAA TTGCCCAATA TCATTTGAGC
TTTCCCATCC CAAATTCGAT TGCCAAACAG ATTACCGCTG AAATTAAAAA CGCTCAGTAA
 
Protein sequence
MTIFTRTERS SNLARTRQRL ALFSASLLML GALCFHPQTV IANEQVATTL SDEQAAAQVL 
DKLNQYSSSA DWDKYFALYR QDGIFIGTDA TERWGMAEFE RYSRPTKGWR YDLTSRHLVQ
HGDVILFDEL LNSPSYGVSR GTGTLIKTNG EWKIAQYHLS FPIPNSIAKQ ITAEIKNAQ