Gene Shewana3_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1208 
Symbol 
ID4477128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1412053 
End bp1413066 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content52% 
IMG OID639725763 
ProductL-threonine aldolase 
Protein accessionYP_868849 
Protein GI117919657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000586474 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGATT TACGCAGTGA TACCGTGACC CAGCCAACAG AGGCGATGCG CTTAGCCATG 
TCGAGGGCTG AAGTGGGTGA TGATGTTTAT GGTGATGATC CGACCGTCAA CAGTTTGCAA
GATATGGCCG CAGAGATGTT TGGTTTTGAG AGTGCGCTGT TTACGGCATC GGGCACTCAG
GCCAATTTAC TCGCATTGAT GGCACATTGT GAGCGCGGGG ATGAATACCT GTGCGGCCAG
CAGGCGCATA ACTATAAATT TGAGGGCGGT GGCGCTGCGG TTCTCGGCAG CATTCAGCCA
CAACCGCTGA CCAATCAGCT GGATGGCACT ATCGCCTTGA CCGATATTGA AGCGGCGATT
AAACCCGATG ACATTCACTT TGCGCGCACG CGCTTACTGA GCCTAGAAAA CACTATCGGC
GGTAAAGTCT TGCCCCAGAC TTATCTTGCC AATGCGCAGG CACTGGCATT TCAGCGTGGC
TTAAAAATTC ATTTAGATGG CGCTAGGGTG GCCAATGCCG CCGTGGCGCA GGGGATAGGG
ATTGCCGATA TTGCGGGGCA TTTTGATTCG GTCTCCATCT GTTTATCCAA GGGATTATGC
GCGCCTGTTG GCTCGCTGCT CCTAGGTGAT GAGCGCCTAA TTAAAAAGGC CACGCGCTGG
CGTAAAATGC TTGGCGGCGG CATGCGCCAG GCGGGGATTT TAGCGGCGGC GGGTAAATTA
GCGCTCATAG AGCAGGTTGA GAGACTTGGG GAAGACCATG AAAATGCTGC GTATCTTGCC
CAGCAATTGA GTCAGTTGAG TGAGTTTGAA ATCGATTTAG CCGCCGTTCA AACCAATATG
GTGTTTGCAA ACCTCGCGAC CAATGTCGAT GAGAAAGCGC TGGCGAAACG TTGCCGTGAG
GCGGGCATTA TCATCAGCCC TGGCCGCACG CTACGCTTTG TGACCCATAA AGATGTGTCG
CGTCAGGATA TTGATAAAGT GCTACAAGTG TTTAAATTAC ATTTGCAGGC ATAA
 
Protein sequence
MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IALTDIEAAI
KPDDIHFART RLLSLENTIG GKVLPQTYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIG
IADIAGHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL
ALIEQVERLG EDHENAAYLA QQLSQLSEFE IDLAAVQTNM VFANLATNVD EKALAKRCRE
AGIIISPGRT LRFVTHKDVS RQDIDKVLQV FKLHLQA