Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1197 |
Symbol | |
ID | 4478714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1404235 |
End bp | 1404846 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639725752 |
Product | glutathione peroxidase |
Protein accession | YP_868838 |
Protein GI | 117919646 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00644229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.718028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTA TATTAGTGAG TGACGTAATA GAGAATAACG AGTTTGCCAA TCTTGGCGCG CCCAATGAGA AGGACATTAT GATGAAACTC CCCTTAGTTA TCTTTGCCAG CCTGTTAAGC ACTAGCGCAT TTGCGGCAAC TTGCCCGAGT TATCTTGATG TTGAAGTGCG TAAATTACAC TCGGATGAGA AGATTAATCT GTGTGAATTG ACTCAGGGCA AGCCAGTGTT ACTGGTCAAC ACCGCGAGTA ACTGTGGTTA CACTCCGCAA TTTAAGGCCC TCGAAGCGCT CCATAAAGAA TACAAAGACA AAGGCTTAGT GGTGATTGGT TTCCCTTCCG ATGACTTTTT CCAAGAAGAA AATGATGAAA AAGACACGGC TAAGGTGTGC TACATCAACT ATGGTGTCAC CTTTACTATG CTCGCTACAT CGCCCGTGAG AGGCAGCGAT GCTAACAGTG TCTTCAAATA CTTAGGAGAT AAAGCCGACT CGCCTAAGTG GAACTTCTAC AAGTATGTCG TCAGTGGCGA TGGCAATACT GTGCAGCAGT TTAATTCTAA GGTTAAACCC GATAGCGCCG AGCTTAAGCA GGCAATAGAA TCAGTGCTTT AA
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Protein sequence | MISILVSDVI ENNEFANLGA PNEKDIMMKL PLVIFASLLS TSAFAATCPS YLDVEVRKLH SDEKINLCEL TQGKPVLLVN TASNCGYTPQ FKALEALHKE YKDKGLVVIG FPSDDFFQEE NDEKDTAKVC YINYGVTFTM LATSPVRGSD ANSVFKYLGD KADSPKWNFY KYVVSGDGNT VQQFNSKVKP DSAELKQAIE SVL
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