Gene Shewana3_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1197 
Symbol 
ID4478714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1404235 
End bp1404846 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID639725752 
Productglutathione peroxidase 
Protein accessionYP_868838 
Protein GI117919646 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00644229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.718028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTA TATTAGTGAG TGACGTAATA GAGAATAACG AGTTTGCCAA TCTTGGCGCG 
CCCAATGAGA AGGACATTAT GATGAAACTC CCCTTAGTTA TCTTTGCCAG CCTGTTAAGC
ACTAGCGCAT TTGCGGCAAC TTGCCCGAGT TATCTTGATG TTGAAGTGCG TAAATTACAC
TCGGATGAGA AGATTAATCT GTGTGAATTG ACTCAGGGCA AGCCAGTGTT ACTGGTCAAC
ACCGCGAGTA ACTGTGGTTA CACTCCGCAA TTTAAGGCCC TCGAAGCGCT CCATAAAGAA
TACAAAGACA AAGGCTTAGT GGTGATTGGT TTCCCTTCCG ATGACTTTTT CCAAGAAGAA
AATGATGAAA AAGACACGGC TAAGGTGTGC TACATCAACT ATGGTGTCAC CTTTACTATG
CTCGCTACAT CGCCCGTGAG AGGCAGCGAT GCTAACAGTG TCTTCAAATA CTTAGGAGAT
AAAGCCGACT CGCCTAAGTG GAACTTCTAC AAGTATGTCG TCAGTGGCGA TGGCAATACT
GTGCAGCAGT TTAATTCTAA GGTTAAACCC GATAGCGCCG AGCTTAAGCA GGCAATAGAA
TCAGTGCTTT AA
 
Protein sequence
MISILVSDVI ENNEFANLGA PNEKDIMMKL PLVIFASLLS TSAFAATCPS YLDVEVRKLH 
SDEKINLCEL TQGKPVLLVN TASNCGYTPQ FKALEALHKE YKDKGLVVIG FPSDDFFQEE
NDEKDTAKVC YINYGVTFTM LATSPVRGSD ANSVFKYLGD KADSPKWNFY KYVVSGDGNT
VQQFNSKVKP DSAELKQAIE SVL