Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1194 |
Symbol | |
ID | 4478711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1401225 |
End bp | 1401941 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725749 |
Product | hypothetical protein |
Protein accession | YP_868835 |
Protein GI | 117919643 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0326541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.680899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA TAGCAGACAG ACTCGCAGTC GCCCAGAGCA GGATCGCGCA AGCGGCGCAA AAATGCGCAC GCCTACCTCA CAGTATTCGC TTACTTGCCG TCAGTAAGAC TAAACCCATG GAAGATATTA TAGCAGCCTA TAATGCGGGC CAGCGTTGCT TTGGCGAGAA CTATGTTCAA GAAGGTGTGA CAAAAATTGA GGCGCTAAAG GCCACGCACC CTGATATTGA ATGGCATTTT ATTGGGCCAC TGCAATCCAA TAAAACCGCT TTAGTCGCCC AGCACTTCGA TTGGATGCAT ACCCTCTCGC GGGAGAAAAT TGCCCAGCGC CTCAATGAGC AGCGCCCAGC ACACCTTGCG CCGCTCAAGG TGTGTATTCA AATCAACATC AGTGATGAAT ACACAAAATC CGGTATCGAT GCCGAGCAGA TGCTGCCACT GGCCGATAGC ATCAGCCAAT TACCCCATTT ACAACTGCGG GGCTTAATGG CGATTCCCAG TGCCACCAAT GACATCGCGC AGCAGACCGA CGAACTCAGC AAGCTTAAGC AGTTATTCGA TACATTAAAA CAGCATTATC CCGCGGTAGA TACTCTCTCC ATGGGCATGA GTAATGACTT AGACGTCGCT GTTGAGTGCG GCTCAACCAT GGTGCGTATC GGCAGCGCCA TCTTTGGTGA ACGGGATTAT GGTGTAAAAG ACACCACCAG CAATTAA
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Protein sequence | MTTIADRLAV AQSRIAQAAQ KCARLPHSIR LLAVSKTKPM EDIIAAYNAG QRCFGENYVQ EGVTKIEALK ATHPDIEWHF IGPLQSNKTA LVAQHFDWMH TLSREKIAQR LNEQRPAHLA PLKVCIQINI SDEYTKSGID AEQMLPLADS ISQLPHLQLR GLMAIPSATN DIAQQTDELS KLKQLFDTLK QHYPAVDTLS MGMSNDLDVA VECGSTMVRI GSAIFGERDY GVKDTTSN
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