Gene Shewana3_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1183 
Symbol 
ID4478700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1390601 
End bp1390927 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content45% 
IMG OID639725738 
Producthypothetical protein 
Protein accessionYP_868824 
Protein GI117919632 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000366643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA ATCGTAGCCG TCGTTTACGT AAGAAAATGC GCGTTGATGA ATTCCAAGAG 
TTAGGTTTTG ACATTACTTG GACCTTCGAT GCATCTGTCT CTGAAGCCGA TATTGATGCA
ACGGTCGATA AGTTTATCGA TGAAGTCATT GAAGCCCGTA AGTTAGGTTT CCACGGCGGT
GGTCATATCG AGTGGGAAGG TATTATTGCT ACCCAAACTA TCGGTAAGTG CACCGAGGAA
GATGTTGCTG CAGTGAAGGC ATTCTGGGCG GGTCAAAAAG TGACTCAACT CGAAGTTAGC
GATCTGTACG ATATCTGGTG GAGTTAA
 
Protein sequence
MAKNRSRRLR KKMRVDEFQE LGFDITWTFD ASVSEADIDA TVDKFIDEVI EARKLGFHGG 
GHIEWEGIIA TQTIGKCTEE DVAAVKAFWA GQKVTQLEVS DLYDIWWS