Gene Shewana3_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1178 
Symbol 
ID4478695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1387037 
End bp1387588 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID639725733 
Productcytochrome B561 
Protein accessionYP_868819 
Protein GI117919627 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000103692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA ATACTAAGTT GAATTATGGA CTTATTGCTA TTGCCAGCCA TTGGCTAAGT 
GCGGTTGTGG TGATTGGACT CTTTGCCGTC GGTGTGTGGA TGGTGGAATT GACCTACTAC
AGTGCATGGT ACAAAACGGC GCCACATTGG CATAAAAGCA TTGGAGTTTT GCTGCTGGCG
GTAACCCTGT TTCGTTTAGT TTGGCGTTTG GTTAATCCAA AGCCCGCTCC TGAGCAAAAT
CACCAGACAT GGGAAAAGGT TAGCGCCCAC ATTGCCCATG GCGCGATTTA CCTCTTATTA
CTAGTGATTA TGGCCGCAGG TATTTTGATT TCGACGGCAG AGGGCCGTGG AATTATGGTG
TTTGACTGGT TTGAGTTACC CGGCCTAACG CCACTGATTG AAAATCAGGC TGATATCGCG
GGGGATATTC ATCAATATGC CGCCTACAGC TTGATTGCTC TGGTTTTACT GCATGCGTTA
GGCGCGTTAA AGCACCATTT TATCGATAAA GATTCAACAC TACTCAAGAT GATTAAATTT
AACCGAGGAT AA
 
Protein sequence
MFRNTKLNYG LIAIASHWLS AVVVIGLFAV GVWMVELTYY SAWYKTAPHW HKSIGVLLLA 
VTLFRLVWRL VNPKPAPEQN HQTWEKVSAH IAHGAIYLLL LVIMAAGILI STAEGRGIMV
FDWFELPGLT PLIENQADIA GDIHQYAAYS LIALVLLHAL GALKHHFIDK DSTLLKMIKF
NRG