Gene Shewana3_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1173 
Symbol 
ID4478686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1383605 
End bp1384177 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content46% 
IMG OID639725724 
Producthypothetical protein 
Protein accessionYP_868814 
Protein GI117919622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATC CTTCATCCAT ATTGTCAGTG ATGTTGTTAA AAAAGCGATA TCTCGGCGCC 
CTGTTTGGAT TAATGCTGCC AGTCGCAGGA TATAGCGCCA CGCCAGCGGC CATCGAAAAG
ACTATGACCT CAGGGCTGGT TGAGGTTGGC CGAGGTGAGA TGGATTGGCT CTGGTTTAAT
GTCTATAAAG CCACACTGAT GACTACTACG GGTAAATACC AGAGCGGGAT TTATCCGCAG
TTATTAGACA TTGAATATTA TCGTGATATT GAGGCGAATG ACCTGTTAGA GGCGACTGCG
GATCAGTGGC GACACTTAGG CTACACCAAG GATGAAATTG CCAATTGGCT GCAATTACTC
AAGGGAATTT GGCCTAATGT TGTGCCTGGC GATCATTTAA GTTTCAAACT CATCGATGCG
CAGCGCAGTC AGTTCTTTTT CAATGGACAG CCGCTTGGGA TTATCGAAGA GCCCAAATTA
GCCGAAGCTT TTCTGGCGAT TTGGTTATCG ACCAATACCA GCCAGCCAAC CTTAAGGGCG
CAATTATTGG GAGAAAAATC ATGCGATTGC TAA
 
Protein sequence
MSHPSSILSV MLLKKRYLGA LFGLMLPVAG YSATPAAIEK TMTSGLVEVG RGEMDWLWFN 
VYKATLMTTT GKYQSGIYPQ LLDIEYYRDI EANDLLEATA DQWRHLGYTK DEIANWLQLL
KGIWPNVVPG DHLSFKLIDA QRSQFFFNGQ PLGIIEEPKL AEAFLAIWLS TNTSQPTLRA
QLLGEKSCDC