Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1168 |
Symbol | |
ID | 4478681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1378897 |
End bp | 1379697 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725719 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_868809 |
Protein GI | 117919617 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCTG TGCAGAACCA CAAAATCAAC ACTGTGCTGA TCACAGGGGC AAGCTCGGGA ATTGGGCTGC AATTAGCCAA GGATTATCTC GCCGCAGGCT GGCATGTGAT TGCCTGCGGG CGAGACAAAG CCAAACTCGA TGCCCTTGCC GAAACCGTGC TGATTGGGGC GACTTGTATC AGCTTTGATA TTAATGAGCG CAGCCAAGTC CAAGAGAATG CTCTCCGTAT CAAAGATTTA CTGACTCAGT GCGCCTGTCA GCTGGATTTA GTAATCCTCA ATGCGGGTGG CTGCGAGTAT ATCGATGACG CTAAACACTT CGACGACAGA TTGTTTGAGC GTGTCGTGCA CACCAATCTG ATAGCCATGG GCTTCTGCCT CGGTGCGTTT TTACCCTTAA TGCCAAGAGG CGCGCGCTTG GCACTGATGA GTTCGAGCGC GACGTATTTA GCCTTTCCCC GCGCGGAGGC CTATGGCGCT TCTAAGGCGG GCGTGCAGTA CTTGGCCGCT AGCCTAAGGC TTGACCTTGC TCAACACGGG ATATCTGTGA GTGTGATTTG TCCAGGATTT GTGGCAACGC CTCTAACGGC CAAGAATGAT TTTGCCATGC CGATGCAAGT TGATGTAAAG GCGGCGTCAA CGGCAATTCG CCGTGGGCTC TCGCGCGGCG TAACCGAGAT CTATTTCCCT AAACGATTTA CTTATTTATT GAAATTGATG TCATTTCTAC CAGCCTTGGT TTGGCAAAAA ATGATCCAAC GGGATAACCA GCCGAAGGCA CTTAAGGATG CAGGACGATG A
|
Protein sequence | MTSVQNHKIN TVLITGASSG IGLQLAKDYL AAGWHVIACG RDKAKLDALA ETVLIGATCI SFDINERSQV QENALRIKDL LTQCACQLDL VILNAGGCEY IDDAKHFDDR LFERVVHTNL IAMGFCLGAF LPLMPRGARL ALMSSSATYL AFPRAEAYGA SKAGVQYLAA SLRLDLAQHG ISVSVICPGF VATPLTAKND FAMPMQVDVK AASTAIRRGL SRGVTEIYFP KRFTYLLKLM SFLPALVWQK MIQRDNQPKA LKDAGR
|
| |