Gene Shewana3_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1168 
Symbol 
ID4478681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1378897 
End bp1379697 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID639725719 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_868809 
Protein GI117919617 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG TGCAGAACCA CAAAATCAAC ACTGTGCTGA TCACAGGGGC AAGCTCGGGA 
ATTGGGCTGC AATTAGCCAA GGATTATCTC GCCGCAGGCT GGCATGTGAT TGCCTGCGGG
CGAGACAAAG CCAAACTCGA TGCCCTTGCC GAAACCGTGC TGATTGGGGC GACTTGTATC
AGCTTTGATA TTAATGAGCG CAGCCAAGTC CAAGAGAATG CTCTCCGTAT CAAAGATTTA
CTGACTCAGT GCGCCTGTCA GCTGGATTTA GTAATCCTCA ATGCGGGTGG CTGCGAGTAT
ATCGATGACG CTAAACACTT CGACGACAGA TTGTTTGAGC GTGTCGTGCA CACCAATCTG
ATAGCCATGG GCTTCTGCCT CGGTGCGTTT TTACCCTTAA TGCCAAGAGG CGCGCGCTTG
GCACTGATGA GTTCGAGCGC GACGTATTTA GCCTTTCCCC GCGCGGAGGC CTATGGCGCT
TCTAAGGCGG GCGTGCAGTA CTTGGCCGCT AGCCTAAGGC TTGACCTTGC TCAACACGGG
ATATCTGTGA GTGTGATTTG TCCAGGATTT GTGGCAACGC CTCTAACGGC CAAGAATGAT
TTTGCCATGC CGATGCAAGT TGATGTAAAG GCGGCGTCAA CGGCAATTCG CCGTGGGCTC
TCGCGCGGCG TAACCGAGAT CTATTTCCCT AAACGATTTA CTTATTTATT GAAATTGATG
TCATTTCTAC CAGCCTTGGT TTGGCAAAAA ATGATCCAAC GGGATAACCA GCCGAAGGCA
CTTAAGGATG CAGGACGATG A
 
Protein sequence
MTSVQNHKIN TVLITGASSG IGLQLAKDYL AAGWHVIACG RDKAKLDALA ETVLIGATCI 
SFDINERSQV QENALRIKDL LTQCACQLDL VILNAGGCEY IDDAKHFDDR LFERVVHTNL
IAMGFCLGAF LPLMPRGARL ALMSSSATYL AFPRAEAYGA SKAGVQYLAA SLRLDLAQHG
ISVSVICPGF VATPLTAKND FAMPMQVDVK AASTAIRRGL SRGVTEIYFP KRFTYLLKLM
SFLPALVWQK MIQRDNQPKA LKDAGR