| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1165 |
|---|
| Symbol | |
|---|
| ID | 4477878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1375876 |
|---|
| End bp | 1376934 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639725716 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_868806 |
|---|
| Protein GI | 117919614 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG ATGATTCAAA GGTTGAGGCC GAAAACCTCG AGAGTCGCGA GCTACTTCCA
ATCGGCGAAG TGTCGCTACT CACAGGGGTA AATGCGGTAA CGCTAAGAGC ATGGCAGCGC
CGCTTTGGGC TGGTCATTCC TGCGCGCACG CCTAAGGGCC ATAGGTTATA CACACCTGAA
AATATTCAAC AAATCCATGA GATCAATGCC TGGTTAGCCA AGGGGGTCGC CATCAGTAAG
GTCAAACCTT TATTGATGAG TTCGGCACTT GCGACCAATG CCGACAGCAC TGCACTGCAA
GAAGGGGATT TGTGGCAGGA GCAGATCACA GCTTTAAATA GTGCGCTGTT TGAACTGGAT
CAACAAAAGC TGCACCAAAT CCTTGATGAA GCCCTAGGTT TATATCCCTT TCAATTGGTT
AAGCAAAAAT TGCTGCAGGC TTGGATGGCA CAGTTACCTG CGTTGCTTGA GCCTCGTTTA
GATGCCGAGC TGTTGCTTAC ATGGTTAGAG AGCGAGTTAG CCAGCCGCAT TGGAGGGCGC
GCCAGTTTTG CCGGGCAGGC CAGTTTGGCG CAAATCGGTC TAGTGTGTTT GCCATCTGTC
CAAGGGCAAA AAACGGCCGA GCAGCTTAGC GGTCAGTCGA ACATGACTCA TTCTAATATA
ATGAATTCGA GTATCACTAA TCGCTTGTAT TGCCTGGTTT TACGCTTAGA ACTTGCCGAG
TTAAGAGTGT CAGTCATTAA CCTTGGCGTG CTCGACACCA CAAGCCTTGG GCTTATCAAC
AATCGGCTCA AGGTAGATGC TGTCTTGCTA CTGCCTGAGG CGAATCATCC GCCATCGAAA
ATCTTTGAGC TGCAAAGCTT GCTCGAACAA ATGGCTCAGC CCAGTTATCT CATCGGACCC
TTTGCACCGA CCCTAACGGC CTTATCGGCG TTTATGGCGC CAGACTTGGC TGAATGGGTT
AGCCAAGTTT CGGCGGCAAA AGAGCAACAT AAGAAACAGC TGCGCAAGCA GAAAAACGCG
GCTGAAGCGC AGCAAGGAGA GCAAGCCGAT GAGCGATAA
|
|---|
| Protein sequence | MKRDDSKVEA ENLESRELLP IGEVSLLTGV NAVTLRAWQR RFGLVIPART PKGHRLYTPE
NIQQIHEINA WLAKGVAISK VKPLLMSSAL ATNADSTALQ EGDLWQEQIT ALNSALFELD
QQKLHQILDE ALGLYPFQLV KQKLLQAWMA QLPALLEPRL DAELLLTWLE SELASRIGGR
ASFAGQASLA QIGLVCLPSV QGQKTAEQLS GQSNMTHSNI MNSSITNRLY CLVLRLELAE
LRVSVINLGV LDTTSLGLIN NRLKVDAVLL LPEANHPPSK IFELQSLLEQ MAQPSYLIGP
FAPTLTALSA FMAPDLAEWV SQVSAAKEQH KKQLRKQKNA AEAQQGEQAD ER
|
|---|
| |