| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1164 |
|---|
| Symbol | |
|---|
| ID | 4477877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1374850 |
|---|
| End bp | 1375803 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639725715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868805 |
|---|
| Protein GI | 117919613 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3272] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAGT TTAATCCGCA GCGAATTCAA ATCGGGATCA GTGCCTGCTT ATTAGGGGAG
AAGGTGCGCT TTGACGGTGG GCATAAAAAT TCTTCCTATT GTAATCAAGA GATTGCCCCA
TTTTTTAATT ATGTTCCCTT GTGTCCAGAA ATGGCGATTG GCCTAGGTGC ACCGCGAAAA
AGCATTCGAT TAGTGCGCGA TGGTGAGCTG ATCCGCGTGC AGAGTGGTGA TGGCAGCTTA
GATGTCACCG ACAAACTCAA TCGCTTTAGC GAGCAAAAGG TTGAGGAATT AGGCTTTTTA
GGCGGTTACT TACTCTGCGC TAAATCGCCG ACCTGCGGTA TGGAGCGGGT GACCGAGTAC
AAAATTGGCA CCAATAATGG CACTAAATCA GGGATTGGAG TGTTTGCCCG TAAGTTGATG
GAGCGTTACC CCTATCTACC GGTTGAAGAA GAAGGTCGTC TGCACGATAT GGTGCTGCGG
GAGAACTTTT TTACCCGAGT CTATGCCTAT CATGACTGGC ACAGAATGTG TCATGAAGGC
TTAACTAAGC ACAAGCTAGT CAAGTTTCAC TCCCGCTATA AGTATCTGTT GATGGCCCAT
AGCCCCAAAT GGTACCGCGA GCTTGGGCCG ATAGTGGCCA ATATTGAAGA CTTAGCTCAA
ACCGCTGAGC GCTATTTTGC GGGCTTTATG ACCGCCTTAA AAATCAATGC CACCCGTCGA
AACCATACCA GCACCTTACA GCATATTCAG GGCTATTTTA AAAAGCATTT GAATAAGGAA
CAGAAGTTGG AACTGTCTGA AATGATAATG AAATATCGCC AAGGGCTTCT CCCTTTGCTG
GTGCCAATCA CCTTGATTAA CCACTATTTG CGTCAATTTC CTACCCCCTA TATTGAGGAT
CAAGTGTACT TAAATCCTCA CCCTGAGGAA TTAAAGCTGC GCTATGCCTA TTAA
|
|---|
| Protein sequence | MYKFNPQRIQ IGISACLLGE KVRFDGGHKN SSYCNQEIAP FFNYVPLCPE MAIGLGAPRK
SIRLVRDGEL IRVQSGDGSL DVTDKLNRFS EQKVEELGFL GGYLLCAKSP TCGMERVTEY
KIGTNNGTKS GIGVFARKLM ERYPYLPVEE EGRLHDMVLR ENFFTRVYAY HDWHRMCHEG
LTKHKLVKFH SRYKYLLMAH SPKWYRELGP IVANIEDLAQ TAERYFAGFM TALKINATRR
NHTSTLQHIQ GYFKKHLNKE QKLELSEMIM KYRQGLLPLL VPITLINHYL RQFPTPYIED
QVYLNPHPEE LKLRYAY
|
|---|
| |