Gene Shewana3_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1158 
Symbol 
ID4477871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp1365177 
End bp1365758 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID639725709 
ProductTetR family transcriptional regulator 
Protein accessionYP_868799 
Protein GI117919607 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACG CAGAGTTTGA TAGGGCGCAG GTGCTCAGGG GAGCGATGGC CGCCTTTATG 
CACAAGGGAT ACACCAAAAC CAGCATGCAG GATCTGACCC AAGCAACGGG ATTACATCCC 
GGCTCCATTT ATTGCGCTTT TAGTAATAAG CGTGGGTTGC TCATCGCCGC TATCGAGCAA 
TATCAGCAGG ATAGAGACGA GCAGTTCAAG CTTATCTTCT CCAATGGCCG TCCCGTGCTG 
GGTAATTTAA AGACCTACTT AGACAATATC GTGGTCGAAT GTTTAAGCTG CGATAGCCAG 
CAAGCTTGTT TGCTCACTAA AGCCTTAAAT GAAATTGCAG AGCAAGATGA TGAAATCCAA 
AACATTATCA GTCAAAACCT CATGCTTTGG CAGTATGCGT TGACGGCACA ATTTGAATTA 
GCGGACTCCC AAGGGATGTT GCATGGCGAG CTTAACAGTG AGCAGCGGGC GCAATACTTG 
ATGATGGGCA TTTATGGGTT AAGAACCTTT GCCCATACCC ATCCGCAGGC GGAAATCCTA 
CAGCAATTGG CCGATAAGTT GTTTGATGAT GTCTGCAGAT AA
 
Protein sequence
MRNAEFDRAQ VLRGAMAAFM HKGYTKTSMQ DLTQATGLHP GSIYCAFSNK RGLLIAAIEQ 
YQQDRDEQFK LIFSNGRPVL GNLKTYLDNI VVECLSCDSQ QACLLTKALN EIAEQDDEIQ 
NIISQNLMLW QYALTAQFEL ADSQGMLHGE LNSEQRAQYL MMGIYGLRTF AHTHPQAEIL 
QQLADKLFDD VCR