Gene Shewana3_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1154 
Symbol 
ID4477867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1361248 
End bp1361793 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID639725705 
Productisochorismatase hydrolase 
Protein accessionYP_868795 
Protein GI117919603 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.399552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACA TGAGCTTGCC TAAAACTGCG CTGTTAATTA TTGATATGCA GCAGGGACTG 
TTTTACGCCG ATGCGCCGCC CTTTAATCGG GAACAGGTGC TAAATAATAT CAATCTGTTA
ATTGCCAACG CCCGCGAGGC AGGGGCACCG ATTTGGGCGG TTCGCCATAC CGGGCCGGAA
GGTTCACCCA TTGCTGCCGG AACGGCAAAT TGGCAATTGA TAGAATCCTT AGCGATTAAT
CCGCAGCTGG ATAATATCTT TGATAAAACT AAGCCAAGTT GTTTTTATCA AACCGGATTT
GCAGAGGCGT TAACCCATGA GGGGATCAGC GAGCTGGTGA TAGTGGGGAT GAAAACCCAG
TATTGTATCG ATACCAATTG CCGGATTGCG GCTGAACTTG GCTGGCAGGT GGTGTTAGCC
GACGATGCGC ACACTTGTAT GGATACGGCG CAGCTCTCGG CTGAGGCGAT TATTGCTCAC
CACAATGCCA CGCTCCAAGG CGCCTTTGTG CGTTTAGCTA AGAGTGCGGA TATCGTATTT
CGTTGA
 
Protein sequence
MDNMSLPKTA LLIIDMQQGL FYADAPPFNR EQVLNNINLL IANAREAGAP IWAVRHTGPE 
GSPIAAGTAN WQLIESLAIN PQLDNIFDKT KPSCFYQTGF AEALTHEGIS ELVIVGMKTQ
YCIDTNCRIA AELGWQVVLA DDAHTCMDTA QLSAEAIIAH HNATLQGAFV RLAKSADIVF
R