Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1154 |
Symbol | |
ID | 4477867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1361248 |
End bp | 1361793 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725705 |
Product | isochorismatase hydrolase |
Protein accession | YP_868795 |
Protein GI | 117919603 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.399552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAACA TGAGCTTGCC TAAAACTGCG CTGTTAATTA TTGATATGCA GCAGGGACTG TTTTACGCCG ATGCGCCGCC CTTTAATCGG GAACAGGTGC TAAATAATAT CAATCTGTTA ATTGCCAACG CCCGCGAGGC AGGGGCACCG ATTTGGGCGG TTCGCCATAC CGGGCCGGAA GGTTCACCCA TTGCTGCCGG AACGGCAAAT TGGCAATTGA TAGAATCCTT AGCGATTAAT CCGCAGCTGG ATAATATCTT TGATAAAACT AAGCCAAGTT GTTTTTATCA AACCGGATTT GCAGAGGCGT TAACCCATGA GGGGATCAGC GAGCTGGTGA TAGTGGGGAT GAAAACCCAG TATTGTATCG ATACCAATTG CCGGATTGCG GCTGAACTTG GCTGGCAGGT GGTGTTAGCC GACGATGCGC ACACTTGTAT GGATACGGCG CAGCTCTCGG CTGAGGCGAT TATTGCTCAC CACAATGCCA CGCTCCAAGG CGCCTTTGTG CGTTTAGCTA AGAGTGCGGA TATCGTATTT CGTTGA
|
Protein sequence | MDNMSLPKTA LLIIDMQQGL FYADAPPFNR EQVLNNINLL IANAREAGAP IWAVRHTGPE GSPIAAGTAN WQLIESLAIN PQLDNIFDKT KPSCFYQTGF AEALTHEGIS ELVIVGMKTQ YCIDTNCRIA AELGWQVVLA DDAHTCMDTA QLSAEAIIAH HNATLQGAFV RLAKSADIVF R
|
| |