Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1153 |
Symbol | |
ID | 4477866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1359708 |
End bp | 1360868 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725704 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_868794 |
Protein GI | 117919602 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGGGAA ATCGATTAAT CAGAGCAGAA ACTATGCTGA TTGGCGCAGG CAGCCTCACC TGGGCGCTCG TTGCTTGGCT AGGGCTCAAT CAGGATATGC AAGCAAAGCT CCCCACGCTC GCGACCTTTA GCCATATCAC CCTGTATTCC TTGTTTATCT TGCTCTTCTT GTTATTAACG ACACAGGACT TTCCCCGAAA AAACCTCAAT CTGAGCAGGC TGTTAAGTAC CGCACTCATC GGCAGCGTCT TCGGATTGAT GCTGTTGAGT CAACATCCAT TGCTCCCCAT TCTGCTGGTA ATTTGGGCCT CGCTCTTGCC AGAATTTTTT AATCGCCGCG TCGCAATAGC ACAGATCTTA TTGGCCAATC TTGGTTATTA CCTGATCCTG CACACCCAAA CCTCAAACAA TGTGATGATT AATGTGCTTA TTTATATGGG GTTTCAACTG TTTGCCTACA GCAGTAGCCA AGCGAGATTA TCCGAGCGCG AGTCTCGCCG GATACAGGAA CATCTTAATC AACAACTTAT CGCCACCAGA GCCTTGCTGA GCCAAACGAG CGAGCAGCAA GAAAGGTTGA GGATCTCACG GGATCTGCAC GATATTCTCG GCCACCAGCT CACGGCGTTA TCGTTGCAAC TTGAGCTCTT AAGTCATCAA GCGCCTTCGG AGCTCAAACC CACAGTCAAT CAGAGTAAAT CGCTTGCCAA GGAATTATTA GAGAGCATCC GCGCCGTAGT TCGGGCGCAG CGGGTGAATA TTGGTCTCGA TTTAACGCCG CCGCTCGATG CCATTGCAAG CCGTTTGCCC AATGTTAGCC TGCGGTACGA ATCGTTAATG CCGCTCCAGT CGACTGAACT GGCACAAGCC TTATTGCTCG TGCTGCAGGA GGGGATCAGT AATGCAGTGC GCCATGGCCA TGCCAATCAA CTCACGCTGT CGATGCAAGA GGAGCAGGCG GAGCTTATCA TTTGCCTTAA AGATAATGGC CAAGGAATTA GCCAAAGCCC CTCTCAGGGC GTTGGGCTAA GTAGCATGCA AGAAAGGTTA TCCCCCTTTC ACGGCAGTGC GCGTTTGCAA GCTAATCACG CAGGCGTAGA TAGTTCGCGT ACTCAAGGCT GCTCGCTAAT GATTCGTCTG CCGCGCTGCA ACGCATTGTA A
|
Protein sequence | MQGNRLIRAE TMLIGAGSLT WALVAWLGLN QDMQAKLPTL ATFSHITLYS LFILLFLLLT TQDFPRKNLN LSRLLSTALI GSVFGLMLLS QHPLLPILLV IWASLLPEFF NRRVAIAQIL LANLGYYLIL HTQTSNNVMI NVLIYMGFQL FAYSSSQARL SERESRRIQE HLNQQLIATR ALLSQTSEQQ ERLRISRDLH DILGHQLTAL SLQLELLSHQ APSELKPTVN QSKSLAKELL ESIRAVVRAQ RVNIGLDLTP PLDAIASRLP NVSLRYESLM PLQSTELAQA LLLVLQEGIS NAVRHGHANQ LTLSMQEEQA ELIICLKDNG QGISQSPSQG VGLSSMQERL SPFHGSARLQ ANHAGVDSSR TQGCSLMIRL PRCNAL
|
| |