Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1140 |
Symbol | |
ID | 4477853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1345289 |
End bp | 1346227 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725691 |
Product | homoserine kinase |
Protein accession | YP_868781 |
Protein GI | 117919589 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0308198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTGA CCGTTTACGC TCCCGCCTCT ATGGGTAATG TGGGTGTGGG CTTTGATTTA TTGGGCGCAG CACTTGCGCC CATCGATGGC AGTTTATTGG GCGATAGAGT CACAATTGCG GCTGCGGATG CGGGGGTGAG CCTCACTCAA GTGGGAGCGT GGGCGCATAA GTTACCCAGC AATCCTGAGG AGAATATCGT CCATCAATGC GCGGTGTTTT TCTTGAAAGC CCTTGGAAAA GAAAACCAAG GCGTGGCATT AACCCTAGAA AAAAACTTGC CCGTCGGCAG TGGCTTAGGT TCGAGCGCCA GTTCTGTGGT TGCAGCGCTT TACGCGCTTA ACGAGCATTT TGAGCGTCCA TACGATAAGC AAGCGCTACT CGAACTCATG GGCGAGTTTG AGGGCAAGAT CAGCGGTAGC GTGCATTACG ACAACGTCGC GCCCTGTTAT TTGGGCGGCA TGCAGCTGAT GCTAAATGTG CCTGGCGCTA TCTGTGAGCC GATTCCCAGT TTTAAACAAT GGTATTGGGT GGTGGCGTAT CCTGGGATTT CACTCTCAAC GGCAATGATG CGTAAACTCA TGCCAGAACA ATACGATAAG TCGGTGGCCA TCGATTTTGG GCGTTATTTG AGTGCCTTTG TACACGCCTC TTATCAGCAA AACGCCAAGC TTGCGATTCA AGTCTTGAAG GATGTGCTGG CCGAACCTTA CCGCGCAGCG GCGATACCGG GTTATGACAA TGCCAGGGCG GCGCTCGCCG AATTAGGCAT GTTAACCACT GGCATCTCGG GCAGTGGGCC AACGCTGTTT TCGGTGACAG ACAATCTTGT GACCGCTAAC GCCGCCAAGG CGTGGTTAGA GGCTCATTAT CTGACTGAAG CGGGGGGCTT TGCCCATGTG TGCCGCCTCG ATGAGCAAGG TACGCGCCGA GTCGATTAA
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Protein sequence | MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AADAGVSLTQ VGAWAHKLPS NPEENIVHQC AVFFLKALGK ENQGVALTLE KNLPVGSGLG SSASSVVAAL YALNEHFERP YDKQALLELM GEFEGKISGS VHYDNVAPCY LGGMQLMLNV PGAICEPIPS FKQWYWVVAY PGISLSTAMM RKLMPEQYDK SVAIDFGRYL SAFVHASYQQ NAKLAIQVLK DVLAEPYRAA AIPGYDNARA ALAELGMLTT GISGSGPTLF SVTDNLVTAN AAKAWLEAHY LTEAGGFAHV CRLDEQGTRR VD
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