| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1135 |
|---|
| Symbol | |
|---|
| ID | 4477848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1339997 |
|---|
| End bp | 1340446 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639725686 |
|---|
| Product | cytochrome c, class II |
|---|
| Protein accession | YP_868776 |
|---|
| Protein GI | 117919584 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3909] Cytochrome c556 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000323618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TACTCCTGAC TCTCGTTGCC GGTACCTTAT TGGCTTCAAC TGCACAAGCA
CACAATTTTG AAGATGCGAA GGACGCGATT GAATATCGCC AATCTGCATT TGGCCTGATT
GCTTATAACT TTGGCGATAT GGGCGCAATG ATGAAAGGCA AGAAACCTTT CGAAGCTGAA
ACCTTCGCAA TGCGCGCCAA CAATGTTGCT GCTCTTTCGC ACATTCCTTT CGAAGGCTTT
ATTGAAGGTT CAGATAAAGG CGATACCGAA GCGCTAGCCA AAGTATGGCA AGATAAGGCT
GACTTCGACG CTAAGATGAA AACCTTCCAA GAAAATGCCG CTATTTTAGC GACTGTGGCT
CAAAAAGGTG ACCAAGCTGA AATCAAGCAA GCCTTTATGA ACACCGGCAA GAGCTGTAAA
GGCTGTCACG ACGTGTACAA AAAAGACTAA
|
|---|
| Protein sequence | MKKLLLTLVA GTLLASTAQA HNFEDAKDAI EYRQSAFGLI AYNFGDMGAM MKGKKPFEAE
TFAMRANNVA ALSHIPFEGF IEGSDKGDTE ALAKVWQDKA DFDAKMKTFQ ENAAILATVA
QKGDQAEIKQ AFMNTGKSCK GCHDVYKKD
|
|---|
| |