Gene Shewana3_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1134 
Symbol 
ID4477847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1339242 
End bp1339931 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID639725685 
Productcytochrome B561 
Protein accessionYP_868775 
Protein GI117919583 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000156363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG AACATATCAA AGTTAAAGTC TGGGATTTAC CCACACGCTT TTTTCACTGG 
GGCATGGTGG CCCTCATGGC CTTACTCTGG TGGAGTGCCG AAGTGGGCGA AATGCAATGG
CACCAGATCT TTGCTTATAG TTTGTTGATC CTGATTGGCT TTCGGCTTTT ATGGGGCTTG
ATTGGCAGTG ATACTGCGAG GTTTAGTCAC TTCGTGCATC ATCCCAAGGT GGTGTTTGAG
TATTTGAAAG ATGTTCGTGC AAAGGGCGTG TCAGTGGTTT TAGGGCATAA CCCGATGGGC
GGTTATATGG TGATTGTGTT GATTGCCATT ATCAGCTTAC AGCTAATCAC TGGACTCTTT
GCTACCGATG ATGTGTTTAC CGAAGGTCCA CTGTACAGCT ATGTGAGTGC TGATACTGCT
TCGTTTCTCA CTTGGTTGCA TAAAATGAAT TTCAACCTCA TCTTAGCCTT GAGTGCCGTG
CATGTGTTGG CTGTCGTTGT ACACGCGCTT AAAGGTGACA AGTTAGTGGG AGCCATGCTC
AGCGGTTACA AACGCGTGTC TAAAGTTGAG CACGCCAAAT CTGAGACTCA GTTGGTGTTT
AAATCACACT GGTTGGCTTT AATTGTGCTG TTAATCATCG CTGGAGTGGT GTTTACCTAT
TTGATGTGGC CCATAGTACA AGTGCTCTAA
 
Protein sequence
METEHIKVKV WDLPTRFFHW GMVALMALLW WSAEVGEMQW HQIFAYSLLI LIGFRLLWGL 
IGSDTARFSH FVHHPKVVFE YLKDVRAKGV SVVLGHNPMG GYMVIVLIAI ISLQLITGLF
ATDDVFTEGP LYSYVSADTA SFLTWLHKMN FNLILALSAV HVLAVVVHAL KGDKLVGAML
SGYKRVSKVE HAKSETQLVF KSHWLALIVL LIIAGVVFTY LMWPIVQVL