Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1130 |
Symbol | |
ID | 4477835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1332240 |
End bp | 1332437 |
Gene Length | 198 bp |
Protein Length | 65 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639725673 |
Product | carbon storage regulator |
Protein accession | YP_868771 |
Protein GI | 117919579 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000245807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTT TGACTCGTCG TGTTGGCGAA ACACTGATGA TTGGTGATGA AGTCACAGTT ACAGTGCTAG GGGTAAAAGG CAATCAAGTG CGTATTGGTG TTAATGCACC GAAAGAGGTT TCTGTCCACC GTGAAGAAAT CTATCAACGC ATTCAATCTG AAAAATCAGG TACACCTTCA GAAGGTGGTA ACTTTTAA
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Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQSEKSGTPS EGGNF
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