| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1128 |
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| Symbol | alaS |
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| ID | 4477833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1328231 |
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| End bp | 1330855 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725671 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_868769 |
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| Protein GI | 117919577 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.12986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAAA CGACAGCAGC GCTTAGAAGT GCTTTCCTCG AATTTTTCCG CAGCAATGGT
CACCAAGTTG TGGACAGTAG TTCTCTTGTA CCAGGCAACG ATCCCACGCT TTTATTCACC
AACGCCGGTA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG TAGCTATACA
CGTGCGACCA CTGCTCAACG CTGCGTCCGT GCGGGTGGTA AACACAACGA TTTAGATAAC
GTTGGTTACA CCGCGCGTCA CCATACTTTC TTCGAAATGC TAGGTAACTT CAGCTTTGGT
GATTATTTCA AAGAAGATGC GATTCGTTTT GGTTGGACAT TCCTGACTGA AGTCTTGAAG
CTACCAAAGG AACGTCTGTG TGTGACTGTT TATCAAACAG ACGATGAAGC CTTTGAAATT
TGGAATAAAA AGATTGGTGT TGCCGCTGAA AACATCATTC GCATCGGCGA TAACAAGGGC
GCGCCATACG CTTCAGATAA CTTCTGGCAA ATGGGTGACA CAGGTCCTTG TGGTCCATGT
ACCGAAATTT TCTACGATCA CGGCGATCAT ATCTGGGGCG GACGTCCCGG TAGCCCAGAA
GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATCGTAT TCATGCAATA CAATCGCCAA
GCCTCTGGTG AAATGTTGCC GCTGCCAAAA CCTTCCGTCG ATACCGGTAT GGGGATTGAG
CGTATCGCTG CGATTATGCA GGGCGTTCAT TCAAACTACG AAATCGATAT TTTCCGCGCC
TTGATTGCTA AAGCGGCTGA AATCATCGGC GTGACTGACT TATCTAACAA GTCACTGCGC
GTTATTGCCG ACCATATCCG TTCATGCGCC TTCTTAGTTG CCGATGGTGT AATGCCATCG
AACGAAGGTC GTGGCTATGT GCTGCGCCGT ATTATTCGCC GCGCCGTGCG TCACGGTAAC
AAGTTAGGGG CAACCGAAGC CTTCTTCTAC AAGTTAGTTC CGACGCTAAT CGAAGTGATG
GGCGATGCCG CTAAAGGTCT TGCAGATACT CAAGTGATTG TTGAAAAAGC CCTTAAAGCG
GAAGAAGAGC AGTTTGCTCG TACGCTTGAG CGTGGTTTAG GTATTCTGGA TAGCGCATTA
AACGAATTGC AGGGCGACAC CTTAGACGGT GAAACTGTCT TCAAACTGTA CGATACCTAT
GGCTTCCCAG TGGATTTAAC CGCTGACGTA TGCCGTGAGC GCAACATTAT CGTCGATGAA
GCCGGTTTCG AAGTGGCGAT GGCAGAACAA CGTAGCCGTG CTCAAGCCGC GGGTAACTTC
GGCGCCGATT ACAACGCTGC TCTGAAAATT GATGCTGAAA CTGCATTCTG TGGTTACTCA
GAACTCACAG GCAATGCCAA AGTCACTGCA CTTTACCTAA ACGGCGAGTC AGTTTCTGCA
ATCAGTGCGG GTGACGATGC CGTAGTCGTG CTCGATGTGA CGCCATTCTA TGCAGAATCG
GGCGGCCAAG TCGGTGACAA GGGCGTATTA GTGGCTCAAG GTATTGAGTT TGCTGTTAGC
GATACGCAAA AGTTTGGTCA AGCTTCAGGT CACAAAGGTA CGTTAACGGC TGGCAGCTTA
AGCGTTGGCC AAGTACTCGA AGCAAAAGTG GATAAGAAAC TGCGTCACCG CACCCAGTTA
AACCACTCAG TGACTCACTT ATTACATGCT GCGCTGCGTC AAGTGTTAGG TACTCACGTT
ACTCAAAAAG GTTCGTTAGT TGACCCAGAG CGTTTACGTT TCGACTTCTC TCATTTCGAA
GCGGTGAAAC CTGCTGAATT GAAACAGGTT GAAGAGTTAG TCAACACCCA AATTCGTCGT
AACCATGAGC TGAAAGTCGC TGAAATGGCG ATTGATGAAG CCAAAGAAAA AGGCGCAATG
GCGCTCTTTG GTGAGAAGTA CGATGCACAA GTGCGTGTTG TCACTATGGG CGATTTCTCT
ATCGAGCTGT GTGGTGGTAC TCACGTTGGC CGTACCGGTG ACATTGGTCT GTTCAAAATT
ACCTCTGAAG GCGGTATTGC TGCGGGCGTT CGCCGTATCG AAGCGGTAAC CGGCGCAGCG
GCGATGGCCT ATGTGGCACA GCAACAAGCG CAACTTGAAG AAGCAGCAGC ACTGCTTAAA
GGCGATACTC AATCTGTTGT GGCTAAGCTG AAAGCACAAC TGGATAAAAT GAAGCAACTT
GAAAAAGACA TGCAGCAACT GAAAGATAAG TTAGCTGCGG CAGCGAGTGC GGATTTAGCC
GGTGATGCGG TTGTAGTTAA TGGCGTAAAT GTGCTGATTA AGAAACTTGA AGGCGTTGAA
GCAGGTGCAC TACGTGGCCT GCAAGATGAG TTAAAGCAAA AACTGAAATC CGCCGTTATC
CTGCTCGGTG TGGCTCAAGA AGGCAAAGTG AACCTTATCG CGGGCGTGAG CAATGACTTA
GTCGGTAAAG TGAAGGCCGG TGAACTGGTT GCTATGGTTG CTGCCCAGGT GGGTGGTAAA
GGCGGTGGTC GCCCTGATAT GGCCCAAGCG GGTGGTAGCC AGCCAGAAAA TCTGGATGCG
GCACTGTCTC AAGTATTACC TTGGATTACT GAGCGTTTAG CTTAA
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| Protein sequence | MYQTTAALRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRSYT
RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEDAIRF GWTFLTEVLK
LPKERLCVTV YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG APYASDNFWQ MGDTGPCGPC
TEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFRA LIAKAAEIIG VTDLSNKSLR VIADHIRSCA FLVADGVMPS
NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPTLIEVM GDAAKGLADT QVIVEKALKA
EEEQFARTLE RGLGILDSAL NELQGDTLDG ETVFKLYDTY GFPVDLTADV CRERNIIVDE
AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFCGYS ELTGNAKVTA LYLNGESVSA
ISAGDDAVVV LDVTPFYAES GGQVGDKGVL VAQGIEFAVS DTQKFGQASG HKGTLTAGSL
SVGQVLEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV TQKGSLVDPE RLRFDFSHFE
AVKPAELKQV EELVNTQIRR NHELKVAEMA IDEAKEKGAM ALFGEKYDAQ VRVVTMGDFS
IELCGGTHVG RTGDIGLFKI TSEGGIAAGV RRIEAVTGAA AMAYVAQQQA QLEEAAALLK
GDTQSVVAKL KAQLDKMKQL EKDMQQLKDK LAAAASADLA GDAVVVNGVN VLIKKLEGVE
AGALRGLQDE LKQKLKSAVI LLGVAQEGKV NLIAGVSNDL VGKVKAGELV AMVAAQVGGK
GGGRPDMAQA GGSQPENLDA ALSQVLPWIT ERLA
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