Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1128 |
Symbol | alaS |
ID | 4477833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1328231 |
End bp | 1330855 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725671 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_868769 |
Protein GI | 117919577 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.12986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAAA CGACAGCAGC GCTTAGAAGT GCTTTCCTCG AATTTTTCCG CAGCAATGGT CACCAAGTTG TGGACAGTAG TTCTCTTGTA CCAGGCAACG ATCCCACGCT TTTATTCACC AACGCCGGTA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG TAGCTATACA CGTGCGACCA CTGCTCAACG CTGCGTCCGT GCGGGTGGTA AACACAACGA TTTAGATAAC GTTGGTTACA CCGCGCGTCA CCATACTTTC TTCGAAATGC TAGGTAACTT CAGCTTTGGT GATTATTTCA AAGAAGATGC GATTCGTTTT GGTTGGACAT TCCTGACTGA AGTCTTGAAG CTACCAAAGG AACGTCTGTG TGTGACTGTT TATCAAACAG ACGATGAAGC CTTTGAAATT TGGAATAAAA AGATTGGTGT TGCCGCTGAA AACATCATTC GCATCGGCGA TAACAAGGGC GCGCCATACG CTTCAGATAA CTTCTGGCAA ATGGGTGACA CAGGTCCTTG TGGTCCATGT ACCGAAATTT TCTACGATCA CGGCGATCAT ATCTGGGGCG GACGTCCCGG TAGCCCAGAA GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATCGTAT TCATGCAATA CAATCGCCAA GCCTCTGGTG AAATGTTGCC GCTGCCAAAA CCTTCCGTCG ATACCGGTAT GGGGATTGAG CGTATCGCTG CGATTATGCA GGGCGTTCAT TCAAACTACG AAATCGATAT TTTCCGCGCC TTGATTGCTA AAGCGGCTGA AATCATCGGC GTGACTGACT TATCTAACAA GTCACTGCGC GTTATTGCCG ACCATATCCG TTCATGCGCC TTCTTAGTTG CCGATGGTGT AATGCCATCG AACGAAGGTC GTGGCTATGT GCTGCGCCGT ATTATTCGCC GCGCCGTGCG TCACGGTAAC AAGTTAGGGG CAACCGAAGC CTTCTTCTAC AAGTTAGTTC CGACGCTAAT CGAAGTGATG GGCGATGCCG CTAAAGGTCT TGCAGATACT CAAGTGATTG TTGAAAAAGC CCTTAAAGCG GAAGAAGAGC AGTTTGCTCG TACGCTTGAG CGTGGTTTAG GTATTCTGGA TAGCGCATTA AACGAATTGC AGGGCGACAC CTTAGACGGT GAAACTGTCT TCAAACTGTA CGATACCTAT GGCTTCCCAG TGGATTTAAC CGCTGACGTA TGCCGTGAGC GCAACATTAT CGTCGATGAA GCCGGTTTCG AAGTGGCGAT GGCAGAACAA CGTAGCCGTG CTCAAGCCGC GGGTAACTTC GGCGCCGATT ACAACGCTGC TCTGAAAATT GATGCTGAAA CTGCATTCTG TGGTTACTCA GAACTCACAG GCAATGCCAA AGTCACTGCA CTTTACCTAA ACGGCGAGTC AGTTTCTGCA ATCAGTGCGG GTGACGATGC CGTAGTCGTG CTCGATGTGA CGCCATTCTA TGCAGAATCG GGCGGCCAAG TCGGTGACAA GGGCGTATTA GTGGCTCAAG GTATTGAGTT TGCTGTTAGC GATACGCAAA AGTTTGGTCA AGCTTCAGGT CACAAAGGTA CGTTAACGGC TGGCAGCTTA AGCGTTGGCC AAGTACTCGA AGCAAAAGTG GATAAGAAAC TGCGTCACCG CACCCAGTTA AACCACTCAG TGACTCACTT ATTACATGCT GCGCTGCGTC AAGTGTTAGG TACTCACGTT ACTCAAAAAG GTTCGTTAGT TGACCCAGAG CGTTTACGTT TCGACTTCTC TCATTTCGAA GCGGTGAAAC CTGCTGAATT GAAACAGGTT GAAGAGTTAG TCAACACCCA AATTCGTCGT AACCATGAGC TGAAAGTCGC TGAAATGGCG ATTGATGAAG CCAAAGAAAA AGGCGCAATG GCGCTCTTTG GTGAGAAGTA CGATGCACAA GTGCGTGTTG TCACTATGGG CGATTTCTCT ATCGAGCTGT GTGGTGGTAC TCACGTTGGC CGTACCGGTG ACATTGGTCT GTTCAAAATT ACCTCTGAAG GCGGTATTGC TGCGGGCGTT CGCCGTATCG AAGCGGTAAC CGGCGCAGCG GCGATGGCCT ATGTGGCACA GCAACAAGCG CAACTTGAAG AAGCAGCAGC ACTGCTTAAA GGCGATACTC AATCTGTTGT GGCTAAGCTG AAAGCACAAC TGGATAAAAT GAAGCAACTT GAAAAAGACA TGCAGCAACT GAAAGATAAG TTAGCTGCGG CAGCGAGTGC GGATTTAGCC GGTGATGCGG TTGTAGTTAA TGGCGTAAAT GTGCTGATTA AGAAACTTGA AGGCGTTGAA GCAGGTGCAC TACGTGGCCT GCAAGATGAG TTAAAGCAAA AACTGAAATC CGCCGTTATC CTGCTCGGTG TGGCTCAAGA AGGCAAAGTG AACCTTATCG CGGGCGTGAG CAATGACTTA GTCGGTAAAG TGAAGGCCGG TGAACTGGTT GCTATGGTTG CTGCCCAGGT GGGTGGTAAA GGCGGTGGTC GCCCTGATAT GGCCCAAGCG GGTGGTAGCC AGCCAGAAAA TCTGGATGCG GCACTGTCTC AAGTATTACC TTGGATTACT GAGCGTTTAG CTTAA
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Protein sequence | MYQTTAALRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRSYT RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEDAIRF GWTFLTEVLK LPKERLCVTV YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG APYASDNFWQ MGDTGPCGPC TEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE RIAAIMQGVH SNYEIDIFRA LIAKAAEIIG VTDLSNKSLR VIADHIRSCA FLVADGVMPS NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPTLIEVM GDAAKGLADT QVIVEKALKA EEEQFARTLE RGLGILDSAL NELQGDTLDG ETVFKLYDTY GFPVDLTADV CRERNIIVDE AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFCGYS ELTGNAKVTA LYLNGESVSA ISAGDDAVVV LDVTPFYAES GGQVGDKGVL VAQGIEFAVS DTQKFGQASG HKGTLTAGSL SVGQVLEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV TQKGSLVDPE RLRFDFSHFE AVKPAELKQV EELVNTQIRR NHELKVAEMA IDEAKEKGAM ALFGEKYDAQ VRVVTMGDFS IELCGGTHVG RTGDIGLFKI TSEGGIAAGV RRIEAVTGAA AMAYVAQQQA QLEEAAALLK GDTQSVVAKL KAQLDKMKQL EKDMQQLKDK LAAAASADLA GDAVVVNGVN VLIKKLEGVE AGALRGLQDE LKQKLKSAVI LLGVAQEGKV NLIAGVSNDL VGKVKAGELV AMVAAQVGGK GGGRPDMAQA GGSQPENLDA ALSQVLPWIT ERLA
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