Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1125 |
Symbol | |
ID | 4477830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1323429 |
End bp | 1326014 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725668 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_868766 |
Protein GI | 117919574 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTA TAGATACCGA TGATTTAGAA AAACATACCC CTATGATGCG TCAATATTTG ACCATGAAAG CAGAGCATCA CGACATGCTG CTGTTTTATC GTATGGGTGA CTTCTATGAA CTCTTCTATG ATGACGCTAA ACGAGCCTCA GAATTATTGG GCATTTCCCT TACGGCCCGC GGCAAAAGTG GTGGCGATCC GATCCCGATG GCGGGTATCC CTTACCATGC GGTTGAAGGC TATCTAGCAA AACTAGTTCA AATTGGTCAA TCGGTCGCGA TCTGTGAGCA GATTGGCGAC CCCGCCACCT CAAAGGGTCC AGTTGAGCGA AAAGTGGTGC GCATCGTCAC CCCAGGTACT TTGACCGATG AAGCCCTGTT GCAGGAGAGA CAAGACAATC TGTTAGCCGC GGTTTACCAA GGTAAAGTTG GGTTTGGCTA CGCGACCCTC GATGTGTCTT CCGGCCGTTT CGTGATTGCC GAATTAGAGA CAAAAGAGTC CCTCGAAGCC GAGCTGCAAC GTACCAATCC GGTCGAAATT CTCTATAGCG AAGATTTTGG CGCGATGGAG TTATTGCATC ATTTTAAAGG CAAGCGTCGC CGCCCTGAGT GGGAGTTTGA TTACGATACC AGCATTAAAC TGCTACTGGC ACAATTTGGC ACTAAGGATT TGCACGGCTT TGGGATTACC GATGCGAGGC TTTCGCTGCA AGCGGCGGGC TGCTTAATGC AATATGTGAA AGACACTCAG CGCACTGCTC TGCCCCATAT CAATGCCATT ACCCGTTTCA ATCAAACCGA TACGATTGTC TTGGATGCAG CAACGCGCCG TAACCTCGAG CTGACACAAA ATTTGAGTGG TGGTCGAGAT AACACCCTAG CAGCCGTGCT CGACAATACA GCCACAGCGA TGGGCAGCCG GATGTTGCAA CGCTGGATCC ATCAGCCGCT GAGAGACCAT GCGCAGATTT TTGCTCGCCA AACGGCGGTC AATGAATTAC TCGAGACCAC GGCCCATGAG TCATTGCATG ATCAGCTTAA AGCCCTAGGC GATATTGAAC GTATCATGGC AAGACTGGCA CTGCGTACAG CTCGTCCAAG GGATTTTGCC CGCCTACGCC AAGCATTAAA CCTATTGCCT CAATTGCAGC AGTCACTCGC GCAGTTAAGT GCGCCCCATA CGGTGAAACT AGGCCAACTC TTAGGTGAGT TTCCCGAAGA GCAACAACTG CTTGAGCGCG CGATTGTCGA TAACCCTCCC ATGCTTATCC GTGATGGCGG CGTGATCCGC GAAGGCTACA ATGCCGAGTT AGATGAATGG CGAGGCTTAA GTGAAGGAGC CACAGATTAT CTGGTTCAGC TCGAAGCGCG GGAAAAAGAG CGTACCGGCA TTGCCACGCT GAAGGTTGGC TACAACCGAG TGCATGGCTA CTACATCGAA GTCAGTCGCC TGCAATCACA GCAAGTGCCA TTAAATTACC AGCGCCGTCA AACCCTTAAG AATATGGAGC GTTACATCAC GCCCGAGCTT AAGGAATACG AAGAAAAAGT GCTGTCGAGC CAAGGTAAGG CGCTTGCCCT TGAAAAACAA CTTTGGGACG AATTATTTGA TTTAATCCTC CCCAAGTTGC ATGAGCTACA AGCCTTCGCC AGAGCCGCAG CCGAACTCGA TGTGCTGAGT AACTTTGCCG AACGTGCCGA AACCTTAGGC TATACCTGCC CAGAACTGAG CAGCGAAATC GGGGTAAAAA TCGAAGCAGG TCGCCACCCA GTGGTCGAGC GTGTGAGTCA AACGCCTTTT ATCGCCAACC CTGTCACCCT GCACAATCAA CGCCGGATGT TGATTGTTAC CGGTCCAAAC ATGGGCGGTA AATCAACCTA CATGCGCCAA GTGGCGCTTA TCACGCTAAT GGCCCATATT GGCTGCTTTG TGCCAGCAGA TCGCGCCATC ATTGGCCCTA TCGATCGGAT TTTTACTCGG ATTGGCGCCT CAGACGATCT CGCCTCTGGT CGCTCAACCT TTATGGTAGA AATGACTGAA ACGGCAAATA TTCTCCATAA TGCGACCGCA CAGAGTTTAG TCTTGATGGA TGAAATTGGC CGTGGCACAT CAACCTACGA TGGTCTGTCA TTAGCATGGT CTGCAGCGGA ATATTTAGCG CAGCAAGTCG GCGCAATGAC GCTGTTTGCG ACCCATTATT TCGAGTTAAC ACAATTACCG GAACTCATGG CTGGCGTCTA TAACGTGCAC CTCGATGCAA TTGAGCACGA AGACACCATC GCCTTTATGC ACGCGGTGCA AGAAGGTGCT GCCAGTAAGA GTTATGGTTT GCAAGTTGCG GCCCTTGCCG GGGTACCTGC ACGGGTGATT AAGGCGGCAA AACACAAGTT ACATCAGCTT GAGAGCCGCG ATCATCAAGT GGAAGGTGCT AATGTTAACG GCACTAGGGC ACCGATCCAA ACCCTGCTCG CCCTGCCTGA GCCAGTGGAG AATCCCGCCG TCAGCAAATT AAAAGATATC AATCCCGATA ACCTGACCCC AAAACAGGCG CTGGATTTAC TCTACGAGCT AAAACGCTTG AGTTAA
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Protein sequence | MNPIDTDDLE KHTPMMRQYL TMKAEHHDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR GKSGGDPIPM AGIPYHAVEG YLAKLVQIGQ SVAICEQIGD PATSKGPVER KVVRIVTPGT LTDEALLQER QDNLLAAVYQ GKVGFGYATL DVSSGRFVIA ELETKESLEA ELQRTNPVEI LYSEDFGAME LLHHFKGKRR RPEWEFDYDT SIKLLLAQFG TKDLHGFGIT DARLSLQAAG CLMQYVKDTQ RTALPHINAI TRFNQTDTIV LDAATRRNLE LTQNLSGGRD NTLAAVLDNT ATAMGSRMLQ RWIHQPLRDH AQIFARQTAV NELLETTAHE SLHDQLKALG DIERIMARLA LRTARPRDFA RLRQALNLLP QLQQSLAQLS APHTVKLGQL LGEFPEEQQL LERAIVDNPP MLIRDGGVIR EGYNAELDEW RGLSEGATDY LVQLEAREKE RTGIATLKVG YNRVHGYYIE VSRLQSQQVP LNYQRRQTLK NMERYITPEL KEYEEKVLSS QGKALALEKQ LWDELFDLIL PKLHELQAFA RAAAELDVLS NFAERAETLG YTCPELSSEI GVKIEAGRHP VVERVSQTPF IANPVTLHNQ RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVPADRAI IGPIDRIFTR IGASDDLASG RSTFMVEMTE TANILHNATA QSLVLMDEIG RGTSTYDGLS LAWSAAEYLA QQVGAMTLFA THYFELTQLP ELMAGVYNVH LDAIEHEDTI AFMHAVQEGA ASKSYGLQVA ALAGVPARVI KAAKHKLHQL ESRDHQVEGA NVNGTRAPIQ TLLALPEPVE NPAVSKLKDI NPDNLTPKQA LDLLYELKRL S
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