| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1123 |
|---|
| Symbol | |
|---|
| ID | 4477828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1321357 |
|---|
| End bp | 1322253 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639725666 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_868764 |
|---|
| Protein GI | 117919572 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGAATG TGGGTTTACT CTTAAACCTC AGTTTAGTGT TGTTGCTTGC GGGCTGTAGC
TTTCAGGCGA GTCGCCCCGC ACCTGTCGAA AGTCTTTCCC ACAGTTATTC CAAACATAAC
AAAGGCCACA TTAAATCTAA TTCATATAAA GTTAAGAAAG GTGACACCCT TTACTCGATC
TCTTGGGCTG CAGGTAAAGA TTTCGCCGAA ATTGCTAAAA TTAATCAATT AGATAAATCG
TACACCATCT ACCCTGGACA GATTCTATAT TTAACGAATG ATCGCGGGCA AAATGGCAAA
GGCTCTACAA CTTTAGGTGG AAGTAATTCA GCGTCTAAAG GACAAAATAA AGCTAATTCT
GTTGATAAAC AATCAGCTAG TAACAATTCA TCCGCGAAAA ACTTGTCAAG TGAACAGCAG
AAAAAAACAC TTGATCAGAA AGCCAAGCCT GCGTATTCTG CAACAAGCTC TCAACAAAGT
ATTAACCCTT CGATCGTCGC CCCGACATCA ACACTGCCAG ACAGTGTGAG TCAGTGGCAA
TGGCCAGTAA GAGGTAAATT GATTGGGACA TACTCTGCCA ATGAGCAGGG AAATAAAGGA
ATTAAGATCG CAGGAAAACG CGGAGATATC ATCAAAGCCG CTGCAGATGG GCGGGTGGTA
TACGCAGGTA GTGCTCTTAG GGGTTATGGT AATTTAGTGA TTATTAAACA TAGTGACGAT
TACCTTAGTG CCTATGCTCA TGCAGATCAG ATCTTAGTCG AAGAAAAGCA ACATGTCCTC
GCTGGACAGA CAGTTGCAAA AATGGGCAGT ACAGGTACTA ATCAGGTAAT GCTTCGCTTC
GAGATCCGTT ACCACGGTCA GTCTGTTAAC CCACTTAACT ATTTACCTAA GCAATGA
|
|---|
| Protein sequence | MLNVGLLLNL SLVLLLAGCS FQASRPAPVE SLSHSYSKHN KGHIKSNSYK VKKGDTLYSI
SWAAGKDFAE IAKINQLDKS YTIYPGQILY LTNDRGQNGK GSTTLGGSNS ASKGQNKANS
VDKQSASNNS SAKNLSSEQQ KKTLDQKAKP AYSATSSQQS INPSIVAPTS TLPDSVSQWQ
WPVRGKLIGT YSANEQGNKG IKIAGKRGDI IKAAADGRVV YAGSALRGYG NLVIIKHSDD
YLSAYAHADQ ILVEEKQHVL AGQTVAKMGS TGTNQVMLRF EIRYHGQSVN PLNYLPKQ
|
|---|
| |